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Detailed information on CNT304630


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41359|PR1_SAMNI, E-value = 4e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30352572Zea maysEragrostis tef19.8970.9981.18186forward

Expression of CNT304630

Peptides detected in this lncRNA

>peptide 1 (41 aa)
TGGRKKSSTQKNLADCLSSHRSNQGHKQSAGRVSKKRHGRK*

>peptide 2 (47 aa)
MPRARGIGRIPRDRIRRACMRSRIHPIIRNMCMMCTSRSCALDMLPK*

>peptide 3 (47 aa)
MRRCRSDLKRARSLACPGRGESAVSRGTGLGEPACARAYIQSYEICV*

>peptide 4 (77 aa)
MCTRYVAKIKSSATYICNGSIYILVWLNAVVVPRRPVAAHDDGVAAVALDASAADAGGGLPDDGLVVAAHLAGVAGV*

Sequence

>CNT304630
TGACCGGAGGAAGAAAAAAATCTAGCACGCAAAAAAATCTAGCGGACTGTTTATCTTCCCACCGCTCTAATCAAGGACATAAACAGTCCGCCGGGCGGGT
TTCTAAAAAACGACATGGCAGGAAGTGAGAGAGATGGGAGGCCATTTTAGCAAAAAGGCAGGAGAGAGATGAGATAATTGTAAGACACTGGATCTTAAAT
GAAAGGACAGGATTTAATCCGTATGATTGGTTTCCTGGCCGGCTGTGTCCAGGCCCGTGGGATGCGTTGACCGTAGCTGCTGACTGTAGTTGCGTGTTTG
ATTGTTTACCTGCACAGCACTATCCGAGCCGGTATGCGTCGGTGCAGGTCAGATCTAAAAAGGGCTCGTTCACTTGCATGCCCAGGGCGCGGGGAATCGG
CCGTATCCCGCGGGACAGGATTAGGCGAGCCTGCATGCGCTCGCGCATACATCCAATCATACGAAATATGTGTATGATGTGTACCAGCAGATCATGTGCA
CTAGATATGTTGCCAAAATAAAAAGCTCTGCAACATATATATGCAATGGGTCGATATATATTTTAGTATGGCTTAACGCCGTCGTAGTTCCCCGGCGGCC
AGTAGCTGCACATGATGATGGTGTCGCCGCTGTTGCACTTGATGCGTCCGCAGCCGACGCTGGTGGTGGTCTTCCAGACGACGGCCTTGTAGTGGCCGCA
CATCTTGCCGGGGTCGCAGGTGTCTGAGTTGTAGTGGTAGTTCTTCTTCTCCTCGCTCCAGCCGTCCACGGTGATCTTCCAGGTCAGCCCCGGGGTGCCC
TCCATCAGCGTCGCGTTCCACACCAGCGGAGGCACGTGCTCCTTGGCGCGGAACACGTTGTGCTCGTTCACGATCTCCTCGATCGCCTTCCCGTTCAGCC
CAACCTCTGGGTCGCCGTCGGGGTCCAGCCCGCCG