Detailed information on CNT30340129


BLAST search results

BLAST vs Swiss-Prot:
sp|P05993|PAPA5_CARPA, E-value = 7e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287698Eragrostis tefTriticum aestivum9.922682.73110forward
CNT30370041Eragrostis tefOryza glumipatula19.4820.9387.5216forward
CNT30575980Eragrostis tefOryza barthii13.5372.8291.33150forward

Expression of CNT30340129

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MNSNSKVSSAYRAVELERSASSLNCNTDGLVCDCLLQTFLTVRGYVFVAVDRHNLCVF

>peptide 2 (65 aa)
RRRRGRRRRAGVRGVRALLQRVGRLDGDAALPARRLDVALHTDVAGLAPAGAPRVLHDPVVLAVL*

>peptide 3 (36 aa)
MISAKWVGTLNRANCFRGSMHKCILFSTTIVGATCK*

>peptide 4 (36 aa)
AAASGTAASGRGSGGSRPSSEGRTARRRCRTSRSSP*

>peptide 5 (33 aa)
MNFAVFVEEVGDSSLHFLHYATFTIRHRIDGRN*

Sequence

>CNT30340129
GCGGCGGCGTCGGGGACGGCGGCGTCGGGCCGGGGTTCGGGGGGTTCGCGCCCTTCTTCAGAGGGTAGGACGGCTCGACGGCGATGCCGCACTTCCCGCT
CGTCGCCTTGATGTTGCGCTCCATACGGACGTAGCCGGACTCGCCCCAGCTGGCGCCCCACGAGTTCTTCACGATCCAGTAGTCCTTGCCGTTCTCTGAA
CCGTAGCCGACGGCGGTGACACCGTGGTCCAGCGCTGTTCCACACGTTCCAGTGAAGATACCCTGAGAGATCAGAAAATGATGATCAGTATTCAGTACAT
GCCACGTAGGTGTATCATGGAACATGGCACTGTAATGTTAACAGCAGCAAAGAATTATTAGATAGATTAGAAAAGGCTGTCTTTGAGGGGCCAATGCTGT
TGTTTGGAAGCGCTACTTTCACTTTATGACAAGGAAATACATCTTCAGAATCTTCTGATGAACTTTGCTGTTTTTGTAGAAGAAGTGGGTGATAGCTCAC
TCCACTTCCTGCACTATGCCACATTTACAATAAGACATCGAATTGATGGCAGAAATTAAAATGCTTCAGAAAGAGGGGACAGTTAGCAGCAAAGGAACAT
GATCTCTGCGAAATGGGTGGGGACACTTAATCGTGCAAACTGTTTCAGAGGTAGTATGCACAAATGTATCCTATTTTCTACTACTATAGTAGGGGCAACT
TGCAAGTGACTACAGAATCATTTCTTCCCATGAAATAATCCAAACTAAACGATGCGAAGGCGACAAATTTAAAGCGATTAGGTGACCAGACGGTCCAGTC
CTAACATGAGCATCTATTTCATCTAAGGCAGAATGGCAGATGCTGCTAATCCATCAAACAGGTTGCTGTAACTTACTGCCGCTTACTGAGAAAGTCAGAA
CTTCATTTGTAACTTAACGAAATGTGTTCAACAAATGAATTCCAACAGCAAGGTAAGTAGCGCTTACCGAGCTGTAGAGCTGGAACGCTCTGCCAGCAGC
CTCAATTGCAACACTGACGGGCTGGTTTGCGACTGCCTTCTGCAGACTTTTCTCACTGTTCGGGGTTACGTCTTCGTAGCTGTCGATCGTCACAACCTTT
GCGTTTTTC