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Detailed information on CNT30439045


BLAST search results

BLAST vs Swiss-Prot:
sp|P30271|AMYB_SECCE, E-value = 7e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30308729Aegilops tauschiiTriticum aestivum50.08100100321forward
CNT30393875Aegilops tauschiiTriticum turgidum93.2999.592.81598forward

Expression of CNT30439045

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MAPVLAALLVGSFQSSVLALIFAKAPLDQHMGHEAEKDQITLLL*

Sequence

>CNT30439045
ATGGACCCATATACAATCACTAAATGAGCACAATATACTTTATTCATTCACTCATATGCACATAATGGAGGTATGTAAGGTCTGATGTACTACAGCTCGT
CGGAAAAGCATCCTTCTGATGACTAATCCAATATTGATGAGTAATCCTCATGATGTACCGTAGCACCACATCTTATTTATCCTCATCGGCTTACTTTTAG
GGCGCGTCAATTCTCACAAAGAGACGATTAACCCTTCTCGTAGACTACAACGCTGAGATTTTTCTTCCAGAACACGCACAAGTAATGTGCTTTATTTATT
GTTAATAAGGCAGAGAAAGGTTTCTCTGTGACACACAACATAAAAGGTATTGTAGATAGTAAAGGTTTCACTACACGGTGGGAGGGAGCTCCCCACCCAT
GCCACCGGTAGGGTCTTCAACCTCCCCACCCATGCCACCAGTGGGGCCTTGAACTGGCAGGTCGGTGTGCTCTTCAAAGGGGAATGGCTCCAGTTTTGGC
TGCGCTGCTTGTAGGATCATTTCAATCGTCAGTTCTGGCCCTGATCTTTGCAAAGGCGCCACTGGATCAACACATGGGTCATGAGGCTGAAAAGGATCAA
ATTACATTATTATTATAGGCCGATGCAAATCAACAAATTTA