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Detailed information on CNT30300916


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 8e-162

BLAST vs NONCODE:
NONMTRT001605, E-value = 4e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3091168Triticum aestivumSolanum tuberosum77.2773.1683.97605forward
CNT30508770Triticum aestivumSolanum lycopersicum77.2758.5784.3605forward

Expression of CNT30300916

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MVVQLEPHNGTLHYKRVYAHIHTLLARNKVGGECPCVVVDGVGEVVSEVLKWTLAGDDGLHKEAEH*

>peptide 2 (43 aa)
MACTKKPNIENMARRPFLISLTLSSANASGSSARPSGSKLPPG*

>peptide 3 (29 aa)
MAQRQWITSSSRFLAKVSGSADNPAVSQP*

>peptide 4 (38 aa)
MPQGRRQGRAGQSCRPGRVGRRFHRAVHRQCGSPRRRP*

Sequence

>CNT30300916
ACAGAATTCTCGTAGTTTTCATTACACAATCAAATCCTCGTAATTTACACCATGGTAGTACAACTTGAACCGCACAACGGCACACTTCACTACAAGCGCG
TGTACGCGCATATACACACCTTACTTGCCAGGAACAAAGTTGGTGGCGAATGCCCATGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCT
CAAGTGGACCCTTGCCGGTGACGATGGCTTGCACAAAGAAGCCGAACATTGAGAACATGGCAAGGCGACCGTTCTTGATCTCCTTAACCTTGAGCTCGGC
GAATGCCTCAGGGTCGTCGGCAAGGCCGAGCGGGTCAAAGCTGCCGCCCGGGTAGAGTGGGTCGACGATTTCACCGAGCGGTCCACCGGCAATGCGGTAG
CCCTCGACGGCGCCCATGAGCACAACCTGACAAGCCCAGATGGCAAGGATACTTTGTGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCGAGGCCACCCT
CGCTAAAGATCTGGGATCCGGCCTTGAACCAAACAGCCTCACCAAATTTAACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACACAACCGAGCGCGCCAAG
CATGGCCCAGCGGCAGTGGATCACCTCCAGTTCACGGTTCTTGGCAAAGGTCTCAGGGTCGGCTGATAACCCAGCAGTGTCCCAGCCGTAGTCACCAGGG
AACTCGCCGGTGAGGTAGCTCGGGGGCTCGCCAGAAAGCGGGCCGAGGTAGAGCACGCGGTCAGAGCCGTACCACGGGCTGCT