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Detailed information on CNT30508770


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 0.0

BLAST vs NONCODE:
NONSTUT001352, E-value = 1e-172

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300916Solanum lycopersicumTriticum aestivum58.5777.2784.3605forward

Expression of CNT30508770

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MDQAWVAQVVKSTLAENLGTGLEPHSFTKFDTITGQELREDTSKSTKHSPSAVDHLKFTVLGKGFRVC*

>peptide 2 (67 aa)
MPPGLQQGLMGRSCHLGRVGRQPHQEVHQQYGNPQQLPSVQLDKPRWPRCFVHGPSLGCPSSQVHPR*

>peptide 3 (47 aa)
MVILPFPEISEAEGESFTACPAKEGEERAIVAAAMVFKERKMRELLV*

Sequence

>CNT30508770
TGGCAATATTTTTTATTCGTGGCTTTGAAAAATGTAACTCAGGATTACACAATCATTGGAAATTTTGAATATTGAAAAAAAATAATCCATTCTAATGTCA
AGTAATTACTGACAACTACTTTACAAGGCCATCAAACAATCAAATTTTAAGAATGTTTAAGATTTTCATTTTCCGGGAACAAAGTTTGTGGCGAAAGCCC
AAGCGTTGTTGTTAACGGGGTCTGCAAGGTGGTCAGCAAGATTCTCCAATGGACCCTTTCCGGTAACAATGGCTTGAACAAAGAATCCAAACATAGAGAA
CATAGCAAGTCTGCCGTTCTTAATCTCCTTTACCTTGAGCTCAGCAAATGCCTCCGGGTCTTCAGCAAGGCCTAATGGGTCGAAGCTGCCACCTGGGTAG
AGTGGGTCGACAACCTCACCAAGAGGTCCACCAGCAATACGGTAACCCTCAACAGCTCCCATCAGTACAACTTGACAAGCCCAGATGGCCAAGATGCTTT
GTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAAAATCTGGGAACCGGCCTTGAACCACACAGCTTCACCAAATTTGACACC
ATTACGGGCCAAGAGCTCAGGGAAGACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAGGTTTCA
GGGTCTGCTGAGAGTCCAGCGGTATCCCAGCCGTAGTCACCAGGGAATTCACCAGTCAAGTAGCTTGGGGACTCACCAGAGAATGGGCCCAAGTACTTAA
CACGGTCAGGGCCATACCATGGACTGCTAGATGGGGCAGACTTGGCAACAGCCTTTCTCATGGTGATCCTTCCATTTCCAGAGATTTCTGAGGCAGAGGG
TGAGAGTTTCACTGCCTGTCCGGCAAAAGAAGGAGAAGAAAGAGCCATTGTAGCAGCTGCCATGGTTTTTAAAGAGAGGAAAATGAGGGAGTTGCTAGTT
TGATATGTAAAAGTTAGTTGTGATGAGCTGAAG