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Detailed information on CNT30298904


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 2e-43

BLAST vs NONCODE:
NONSTUT000620, E-value = 1e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30666113Triticum aestivumTriticum dicoccoides85.0192.4598.49465forward
CNT30721915Triticum aestivumTriticum spelta78.61100100430forward

Expression of CNT30298904

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MARHLLATTETEHQVEGGLLLDVVVSEGATVLKLLASEDEALLVRRDALLVLDLRLDIVNRVRGLDLKGDGLAGE

>peptide 2 (36 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVR

>peptide 3 (42 aa)
MQLLRLNSKRRHKFRAHLFIHFTVHPNLLRSESSRTQPNIST*

Sequence

>CNT30298904
TAGCATTTTGTTTACGGGGAAACTTCTCAGCAGCCATTGAAGCCGAGGTATAAAATAAAACACCTAAAGCAGATCATGCAATTGCTTAGGCTTAACAGCA
AAAGGAGGCACAAGTTCAGGGCTCACTTATTCATTCATTTCACAGTTCATCCAAATCTGCTGCGGTCAGAAAGTTCACGGACACAACCAAACATAAGTAC
ATAACACTAGACCACAGCACGGTAGCAACAAAGCACAAGACCAGACGAGGACACACTGACAATCCGATCGGAGGACACAGAAAGGCAACCGACTTGTGAG
CCCACAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG
AGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAA
TCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGG