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Detailed information on CNT30297383


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696855Triticum aestivumOryza sativa14.9823.9990.3683forward
CNT30439260Triticum aestivumAegilops tauschii44.9541.4399.6249forward
CNT30231657Triticum aestivumAnanas comosus22.212.5887.8123forward
CNT30104073Triticum aestivumOryza rufipogon32.6722.4384.53181forward

Expression of CNT30297383

Peptides detected in this lncRNA

>peptide 1 (52 aa)
LFSTRKLSTQRKSRTGEHETRPTSQPLSLWNTRNVSTRTAGGEAGHRTSTVI*

>peptide 2 (32 aa)
IQHSEAKHAEKITHRRARDQAHVPASLTMEHT*

Sequence

>CNT30297383
TTATTCAGCACTCGGAAGCTAAGCACGCAGAGAAAATCACGCACAGGCGAGCACGAGACCAGGCCCACGTCCCAGCCTCTCTCACTATGGAACACACGTA
ACGTAAGCACACGCACGGCCGGCGGCGAGGCCGGCCACCGCACGTCAACGGTGATCTAGCCGAAGTGGTGGTGCTTCTTCTCGCCGCTGGCCTCCTTGGC
CTCCTTGTGGTCCTGCTTCTTCTCGTGGTGCTCGTGGAAGACGAAGCCGCCGGCGCCGACGGCTGCAGCGGCGGCCACCTCCTCCTCGATCTTGTGCTTG
TGCGCGTGCTCCTTGTGCTTGTGGTGCTTCTCCTCCTTGGTGATCCGCTCGTACTCCCCCTCGTTGCCGGTGGCGGTCACCACCGTCTCGGTCGAGTACC
CGTACGTGTCGACGCCGCCGTCAGCGGCGGGCTGGAAGTCCTCGCCCTCCTTGTGGTGGAACAGGTGGTGGTGGTGCTTCTCCTCCGCCATGGCCGCCGG
CTGATCGATTAGCTAGCTAGCACTTGTGTGTGTATGCGACAGTAGGACAGCTGC