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Detailed information on CNT30295923


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30183720Triticum aestivumSecale cereale37.7441.5589.61337forward
CNT30439030Triticum aestivumAegilops tauschii36.3990.5391.38325forward

Expression of CNT30295923

Peptides detected in this lncRNA

>peptide 1 (30 aa)
LFSFINMVLLSKKNIPEKGKACSEAVIVLP*

>peptide 2 (30 aa)
MERTQSTHIHTHHSLACSEQTGIRKESYKH*

>peptide 3 (90 aa)
MAASQKLLSTLSSSSADGSYLAVVGAEAFGGQVAPGVENAPPHAAAARGRRRRRRHRRGRGRRHRRRLLNRLPCSCTSTNTHVNHHQFTQ*

>peptide 4 (49 aa)
MARGPSPGEARPPRRPTACPASCAEVGSDRCKNLCHSLVLLPTDKIKCTG

Sequence

>CNT30295923
TTGTTTTCCTTCATAAATATGGTGTTATTGTCTAAGAAAAATATACCAGAAAAAGGAAAAGCTTGCTCTGAGGCTGTTATTGTCTTACCATAGTAGGTGG
TTAAACATTGAGAACACCACACCACACACACGAGAATTTACACATGGAGCGTACACAAAGTACACACATACACACCCATCACTCGCTAGCATGCAGTGAG
CAGACCGGGATAAGAAAAGAAAGTTACAAGCACTAGTAGACAGTAGTACGAAGCTCAAGACAAACCACATGCAGCCTCGGACGGCAACGTACGCTATGCA
GGATTAGATAACCAAAAGAGCAGCAAACATGGCGGCGTCGCAGAAGTTGTTGAGCACCCTCTCTTCTTCTTCGGCCGACGGCTCTTATTTAGCGGTGGTT
GGCGCCGAGGCTTTTGGTGGCCAGGTTGCTCCCGGGGTGGAAAACGCTCCGCCACACGCTGCCGCCGCGCGGGGGCGTCGACGACGACGGCGTCACCGGC
GTGGTCGGGGTCGTCGGCATCGACGGCGACTGCTTAATCGCCTCCCCTGCAGCTGCACCTCCACCAACACCCATGTAAACCACCATCAGTTCACACAATG
AACCCAATAGATCCTCCGCTTAAACATCAAATCTTCTTCTGAAAACCACTGGTGCTAGACTGACCGCTAGTTCTTACGTTCTTCCAGTTTCAGGCCATGT
CGGTACCTCTGTGCTAACGTATGTAAACTGTACCTGTGTTGATGGCGAGAGGCCCGTCTCCGGGCGAGGCCCGGCCACCACGTCGTCCCACAGCTTGTCC
AGCATCTTGCGCAGAAGTTGGATCTGATCGGTGCAAGAACTTGTGTCACTCGCTCGTACTACTACCCACCGATAAGATCAAGTGCACTGGCCG