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Detailed information on CNT30292299


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30384324Triticum aestivumTriticum turgidum78.1510.5998.12372forward
CNT30687187Triticum aestivumTriticum urartu78.3624.2195.98373forward

Expression of CNT30292299

Peptides detected in this lncRNA

>peptide 1 (31 aa)
AGSPKRPCILPRPPLLCDGGGRPTMRPLHRQ*

>peptide 2 (48 aa)
RRVSQEAMHPAATTSTMRRWWPTYNATAASPVTSSQWQHKQEPWLLLV*

>peptide 3 (76 aa)
PGLPRGHASCRDHLYYATVVADLQCDRCIASNLFAMATQAGTLATPRLSPQVVGFSVHGSHHLGMLDASPECCIVL*

Sequence

>CNT30292299
CGCCGGGTCTCCCAAGAGGCCATGCATCCTGCCGCGACCACCTCTACTATGCGACGGTGGTGGCCGACCTACAATGCGACCGCTGCATCGCCAGTAACCT
CTTCGCAATGGCAACACAAGCAGGAACCTTGGCTACTCCTCGTTTAAGTCCCCAAGTGGTAGGGTTCTCTGTTCACGGGAGTCACCATCTAGGCATGCTT
GATGCTTCACCAGAATGCTGCATTGTTCTTTAGCTGTCGATTGTCTGTGTAGATTGACTGTATCGAGTTGAGGGCTTGAGGCAGGCTGTAGGTGATTAGA
ACAACCACCTGTTAAGTAAGATCGGCTGTAGTGTATGCTCTGAACATAAGCTTGCGTTGCTGCCAGTGTAGTGTATGCTCTGAACACAAGATCCTTTACT
TGCTCTGGTTTGGTTAAGACTGATGATGCCGTGGATAAGAAAACAATTTAAAAGGTCTGTTGAAACAAGGTGGAAG