« Back to Triticum aestivum search


Detailed information on CNT30286472


BLAST search results

BLAST vs Swiss-Prot:
sp|P51994|RBL_BAMML, E-value = 3e-37

BLAST vs NONCODE:
NONORUT002429, E-value = 2e-109

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044322Triticum aestivumPrunus dulcis26.075.4693.4461reverse complement
CNT30435662Triticum aestivumAegilops tauschii81.259.56100190forward

Expression of CNT30286472

Peptides detected in this lncRNA

>peptide 1 (77 aa)
PPNNRLDVIASSFVTIKTGKSISPNSCPCTSRRFGSYCSPCFFGRNPRLRTYSECCQDISILSFILWGVVSQFIIFNT

Sequence

>CNT30286472
CCCCCCAACAACAGGCTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGAT
TCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGCGGAACCCCAGGCTGAGGACTTACTCGGAATGCTGCCAAGATATCAGTATCCTTAGTTTCATACTCTG
GGGTGTAGTAAGTCAATTTATAATCTTTAACACC