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Detailed information on CNT30272386


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019671Chenopodium quinoaCitrullus lanatus23.0330.182.24152forward
CNT30380439Chenopodium quinoaManihot esculenta18.7923.2689.52124forward
CNT30503796Chenopodium quinoaNicotiana attenuata26.8252.2186.44177forward
CNT30709153Chenopodium quinoaGlycine max17.4222.3387.83115forward

Expression of CNT30272386

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MVILPSPRISEAVGPSFTAFPAREGEDRAIVEDAIVKKEKHK*

Sequence

>CNT30272386
TGGGCTTTGTATGAATATACAGATGGATTAGTGAATATATAGATGGATTGGTAGTATACAATTTCAAGCCTTTATCGGTTTGATTTAATTCATATATCTT
CAAATTGAAGCTAATATAGAAATGAAATCAATCAAAGGCACAAGTGCATAAAATATGTAAAATGATTAGCACACAAAATTAAGGGTTATATTCATTCATC
AAAGAGTTGAGATCAAACACAATTTACATTCATTTCTCCTCAAATTCTCACTAAAAAATCCTAAACAAACACATCACTTTCCGGGAACAAAGTTGGTGGC
GTAGGACCAAGCATTGTTGTTAACTGGGTCCGCAAGGTGCCCAGCAGTGTCCCAACCATAATCTCCAGGGAATTCACCAGTGAGGTATGATGGGGCCTCA
CCGGAGAATGGGCCCAAGTACTTAACACGGTCTGGGCCGTACCATGGGCTTCCTGATGAAACAGTTTTGGGCTTTCCGGCAGTCTTCCTCATGGTGATCC
TTCCCTCTCCGAGGATTTCGGAGGCGGTTGGGCCGAGCTTTACGGCCTTTCCGGCTAGGGAAGGGGAGGATAGAGCCATTGTGGAGGATGCCATTGTAAA
AAAGGAGAAACACAAGTGAAAGTAGGAAGTAGAAGTGATAATAATGGAGTGGGGTTTGAT