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Detailed information on CNT3026122


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZG8|MIK2_ARATH, E-value = 1e-74

BLAST vs NONCODE:
NONMEST000927, E-value = 1e-38

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379502Populus trichocarpaManihot esculenta18.922.9786.15130forward
CNT30572334Populus trichocarpaVitis vinifera25.1514.3684.97173forward

Expression of CNT3026122

Peptides detected in this lncRNA

>peptide 1 (45 aa)
CTQRCQQMMSNWMSQALRAWLCRSQRHEPHILNPKEHCCWKCLYE*

Sequence

>CNT3026122
GTGTACCCAAAGGTGCCAGCAAATGATGTCCAATTGGATGAGTCAGGCATTAAGAGCCTGGCTGTGCCGAAGTCAGAGACATGAGCCTCATATTCTGAAT
CCAAAAGAACATTGTTGCTGGAAATGTCTCTATGAATAATCGGAGGAGAGCAGTCATGGTGCATGTAGGATAAAGCATTTGCTACGCCTTTGATAAGATT
CATCCTTTTATCCCAATCCATCTTTACTGCTTGTTCCTCGTCGTTCAGTACCTTTCTTAAACTTCCCCTTTCCACAAATTCATATACCAAAAATGAGTGT
TTGGCATGCGAGCAGAAACCATACAGCTTCACAATATTTCGATGCCGTATACCCATTAAGACATCAATCTCGCTTCTAAAAGCTTTCAAGCTGCTCATCT
CAACTTCTGGTGTTTGGTGAAACTTCTTCACGGCAAGGACTTGTTCTGATGGAAGTACAGCTTTGTATACAGCTCCATACCCTCCAGTACCAATGCAATA
TTTGGAGTCGAATTCCTCAGTAGCCTCAATGATGTCCTCGTAGCGCAGTTCCCCATCAGGGCACCATCTCGCGGGAACATCTTTTTGTGGTGTTTCCATT
AACCTTTTCTTTCTTCCGCTTTGGAAAAAGATAAGGAAACCTACAATCAGGCCCAACAAACTACCCAGCAGAGAAAATACAGTCAAAA