Detailed information on CNT30249469


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223926Avena sativaHordeum vulgare39.0330.0389.73185forward
CNT30722009Avena sativaTriticum spelta35.4440.189.88168forward

Expression of CNT30249469

Peptides detected in this lncRNA

>peptide 1 (61 aa)
RQPYTEIEIFYTLPAAAADRRANQLSATRRRRDEGQVEEEEDEEAQEEAPKDEAAIEVGAL*

Sequence

>CNT30249469
GCCGCCAACCATATACTGAGATCGAGATCTTCTACACACTTCCCGCCGCCGCCGCAGACCGGAGAGCGAACCAGCTGAGCGCAACCCGCCGCCGCCGCGA
TGAGGGCCAAGTGGAAGAAGAAGAGGATGAGGAGGCTCAAGAGGAAGCGCCGAAAGATGAGGCAGCGATCGAAGTAGGTGCCTTATGAGGAGTGGAAGCA
TCGTCTTCAACCAGGCAGCTGGACATCGAGGGATGATGGCATCGTCTTGTGATTCCTGATGTGTTCTGCTGTTGCAGTTGTGGATTGTGTTTTATCTGTC
ATTGATCCTAATAGACCTGTTATCCCCACAGACTGAATTTATGTTATGTAAGGATTTTATATGTTTATGTGACTGAACCTTATGCCGTGAGTTTTGAGCT
TTCCTGTTCTTCCTTATCTGTTTGATGCAAGGATTTTGTCCCTTATGCATACGTATGGCCTCTTCAACGTTTAG