Detailed information on CNT30247753


BLAST search results

BLAST vs Swiss-Prot:
sp|P29250|LOX2_ORYSJ, E-value = 9e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522025Avena sativaSetaria italica39.8560.6286.62157forward
CNT30224272Avena sativaHordeum vulgare57.3679.8692.04226forward
CNT30722126Avena sativaTriticum spelta41.8827.6490.3165forward

Expression of CNT30247753

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGMRSLTSWSGNCLRISSRAGMSGSLMPPS*

>peptide 2 (30 aa)
MSLKELNSPGERSTYVRMAGMMPSTSALSE*

Sequence

>CNT30247753
TAAGTAACGTACCCTTGATTATTTGTGGCTTGGGAAGCTTGAGGATGTAGTCGCCACCCATGGGGATGAGATCCTTGACGAGCTGGAGCGGGAATTGCTT
GCGCATCTCCTCGAGGGCCGGGATGTCGGGCAGCTTGATGATGTAGTCGCCACCCATGGGGATGAGATCCTTGACGAGCTGGAGCGGGAATTGCTTGCGC
ATCTCCTCGAGGGCCGGGATGTCGGGCAGCTTGATGCCGCCCTCGTAGAGCTTGAGGATGTCCTTGAAGGAGTTGAACTCGCCGGGGGAAAGGTCGACGT
ACGTGCGGATGGCCGGAATGATGCCGTCGACGAGCGCCTTGAGTGAGTAGCCGAGGAAGTCCGACTGCTTGAGATGCCCGAANNNNNNNNNNGT