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Detailed information on CNT30242694

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30387265	Avena sativa	Triticum turgidum	60.28	60.82	94.46	343	forward
CNT30349048	Avena sativa	Eragrostis tef	40.6	40.46	87.45	231	forward

Expression of CNT30242694

Peptides detected in this lncRNA

>peptide 1 (43 aa)
LSRHECLREIDLVFIHSSCTIKETHTCTCPLLHVRCIPDPEQI*

>peptide 2 (52 aa)
MLEGNRPRVHPFLMYNQRNTHMHMPSSTRTVHPRPRANLIKFPDRSVIFMRR*

>peptide 3 (95 aa)
MSWCFPPSSPSAVLEADLGEELLRGSVLGDGLLGGGVDYDGEVAGGVEVVLVAEHLSGELTLLARVPLGRDQQLETLPAVRLEVRVLLRLPEHVRC

Sequence

>CNT30242694
GCTGTCCAGACATGAATGCTTGAGGGAAATCGACCTCGTGTTCATCCATTCCTCATGTACAATCAAAGAAACACACACATGCACATGCCCTCTTCTACAC
GTACGGTGCATCCCCGACCCCGAGCAAATTTGATTAAATTCCCTGATCGATCGGTCATATTTATGCGACGCTGAAGGATCCCGCTGCGTTCTCGACGAAC
TTCTTGGCGCCCTTGAACCACCTCTTGTCTCCGGCCTGCGCCTTGCAGACGTAGAGCTTGCCGTCGGCGACGGTGGCGGTGATGAGCTGGTGCTTCCCTC
CCTCGTCCCCGTCGGCCGTCCTGGAAGCCGACCTCGGAGAGGAACTGCTCAGGGGATCCGTACTCGGTGATGGTCTTCTTGGTGGTGGGGTTGATTACGA
CGGAGAGGTTGCTGGTGGCGTCGAAGTTGTCCTCGTAGCGGAGCACCTGTCCGGGGAACTCACGCTCCTTGCTCGGGTTCCACTTGGCCGGGATCAACAG
CTTGAAACCCTCCCCGCTGTACGTCTTGAAGTCCGTGTTCTTCTTCGCCTTCCCGAACACGTTCGCTGC