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Detailed information on CNT30237431


BLAST search results

BLAST vs Swiss-Prot:
sp|A4QLT7|NDHK_NASOF, E-value = 3e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3082972Brassica oleraceaBrassica juncea87.5722.1199.56451forward
CNT30232585Brassica oleraceaAnanas comosus36.755.4389.95189forward
CNT30353934Brassica oleraceaEragrostis tef40.3933.3389.42208forward
CNT30101297Brassica oleraceaOryza rufipogon22.3317.6190.43115forward

Expression of CNT30237431

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MKASIKADTPSTSKLIAHGYRKTVSTSKTTKTRENI*

Sequence

>CNT30237431
CCATTTTCATTGTTACTGTACCTGCTGTTAAAATAAGGTCCGCCTGTCTAGGACTTGATCTTGGTACTAGCCCATAACGATCAAAGTCAAATCGGGAGCC
TATTAATGAGGCAAATTCAATAAAACAACAACTGGTACCATAAAGAAGCGGCCATAGGCTGGAAAGTCTTGACCAATTTGAAAGATCATTTAACGTAGTT
GAAATAACTGAGTTTTTTGTTGTTCGATCAAGTACGGGAAACTTAATGGAATTCATAATTGTTTCAATGGTTTTTTTTTTACTTTTTTTTTATTGTTATT
GTACAAGTATTCAGGAAACGAACTAAGACCATTCCAACGCTCCTTTTCGCCATGCATAAACTAAACCAAGAATTAGGATAAGCACGAAAATGAAAGCTTC
TATAAAAGCGGATACCCCTAGTACATCGAAACTCATTGCCCACGGATACAGAAAAACGGTTTCAACATCAAAAACAACAAAAACTAGAGAAAACATATAA
TAACGAATTCTAAAT