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Detailed information on CNT30226915


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 4e-82

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192275Hordeum vulgareSecale cereale62.0299.7694.02418forward
CNT30307860Hordeum vulgareTriticum aestivum7363.992.28492forward

Expression of CNT30226915

Peptides detected in this lncRNA

>peptide 1 (44 aa)
GNQFYISQQPENIKCIRKIARNHSITKTANIRPRDSRGSGLTYS*

>peptide 2 (53 aa)
MPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRSRSTRWSVDSFWML*

Sequence

>CNT30226915
GGTAATCAGTTTTATATCAGTCAGCAACCAGAAAACATCAAATGCATCAGAAAGATAGCAAGAAACCACAGTATAACAAAAACAGCAAACATCAGACCTA
GAGACAGCAGAGGTTCAGGGCTCACTTATTCATAGTTCAAAGATACAAACGATAAAACTGCATCACAGTACGGTACAGAAACAAAGACACAGACGAGACT
CCATTAGAACACCAGAGACACCGAGCCTTGTGAACCTAGAGACAGGAGCAGCTCCATCACCAGGAGCTTAGTGGCCACCACGCAGACGGAGCACCAAGTG
AAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCCAAGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGGTCCGGGGGAATGCCC
TCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCA
TGCCACCACGGAGCCGGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTATAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGAT
GAGACGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAGG