Detailed information on CNT30192275


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-86

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-82

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226915Secale cerealeHordeum vulgare99.7662.0294.02418forward

Expression of CNT30192275

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILAFTLSMVSEDSTSKVMVLPVRVLTKICIPPRSLSTRWSVDSFWML*

>peptide 2 (65 aa)
SSSTARSLLSTTQTEHQVKGGILLDVVVRQGAAILELLTSKDQALLVRGDAFLVLDLGLHVVDGV*

>peptide 3 (72 aa)
KQLHRQELTVHHADGAPSEGWNPSGCCSPPRCGHPRAAYQQRSGAAGPGGCLPCPGSWPSRCRWCLRTQPPR*

Sequence

>CNT30192275
AAGCAGCTCCACCGCCAGGAGCTTACTGTCCACCACGCAGACGGAGCACCAAGTGAAGGGTGGAATCCTTCTGGATGTTGTAGTCCGCCAAGGTGCGGCC
ATCCTCGAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCTGAG
GACTCAACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGCCTGAGCACCAGGTGGAGTGTGGACTCCTTCT
GGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTT
AGCCTTGACGTTGTCGATG