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Detailed information on CNT30225078


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 2e-73

BLAST vs NONCODE:
NONGMAT000502, E-value = 1e-37

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30665960Hordeum vulgareTriticum dicoccoides27.5248.9494.88391forward
CNT30349331Hordeum vulgareEragrostis tef25.1287.9392.44357forward

Expression of CNT30225078

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVDQTHN*

>peptide 2 (59 aa)
RCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 3 (35 aa)
MHRKDRQLLGPTTKIRREFQVHPSQIKHRCNIKGS*

>peptide 4 (35 aa)
MHKYMLTDPSNIISNNLTQSRTDAQERSATTRPNN*

Sequence

>CNT30225078
CGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCAGATGACTCAACCTCCAGGGTGATGGTCTTGCCAG
TGAGGGTCTTAACGAAGATCTGCATACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCGTC
CTCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGAC
TCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGCAAACATAAAGTGGACCAAACCCATAATTAGGCACCCAGTAAAC
CGAAATCTGCAGGACATAAAAGCATACATGAACCAGAAGCGTAAGATCAAAGAGAGATGAAAATCGATATTCAAGTTTGACTACATGCGAACAGATTCAA
GATCAAGTTTGACTTACAAGCTAACAGATACTAGTGAATACTGAATATAGATGATTTTCTGACCAGAACAGATGCACAAGTACATGCTAACAGATCCTAG
TAATATTATAAGCAACAATTTGACCCAGAGCAGAACCGATGCACAGGAAAGATCGGCAACTACTAGGCCCAACAACTAAGATACGTAGGGAATTTCAGGT
GCATCCTTCACAGATCAAGCATAGGTGCAATATAAAAGGCTCGTAAGCGCCACAAAGTCTGAACGACTTAGCAGAAACCGAGCGAAATCAATCAACTACA
CACCTAGATGAACAGAATCAACATCAGTTGCATCTCAAATCGGCAGATCTACCCAATAATCCACGCATAGTCGTGAGGGATTTCACGACAACTGACGCCG
TAGCCCGTAGCCCAATCAACAGCAATCTACCAAGAAATATATCGTCTCGAACTAGTACTACTAACATGTAACGAGCGGAACCAACTAGACAGCTAGATAG
ACGAACAGAATCAAAGATCAATCACATCCCGAATCGGCAGATCTACCCGATAATAATCCTAGAACAATCGGAAGGGATTTCGCGACAACCGACTACTACG
GCTCGGCATCAACAGCAATCGATCAACAATAACATGCTCGTCTCGAAAGAATAATCTATCGAGATAGCAATAAGGAGAAGCGGGGTCTGAAATTCGCGTA
CCTCGGAGGTGGAGGAGAAAGCCTTGGCTTCGATTCGATCGGAAACTTTCCGGGGATCGCTTGGCAGGAGGGGAGGATTTGGATGAGCGGAGAGGAGACG
GGAGGGGTGGGGATTTAAAGGGGGAAGAGTCCCGTGAGGCTACGGCAGGTGGCGATGCGAAGAGAAAGGTTGCGGTATCTACCACGCAATTTCGGGCAAA
GGAGAGGAGGAGAGCGACCCG