Detailed information on CNT30665960


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-77

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299711Triticum dicoccoidesTriticum aestivum89.3689.799.02714forward
CNT30225078Triticum dicoccoidesHordeum vulgare48.9427.5294.88391forward
CNT30722018Triticum dicoccoidesTriticum spelta82.85100.6198.94662forward

Expression of CNT30665960

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYRNHSKALVIMKLQNIKHM*

>peptide 2 (63 aa)
MARHLLATTETEHQVEGGLLLDVVVSEGAAVLELLTSKDEALLVRWDALLVLDLRLHIVNGVR*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSSVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 4 (71 aa)
RLNSKRRHKFRAHLFIHFTVHPNLLHRSRKFTDTTKHKYITLDHSTVATKHKTRRGHTDNPIGGHRKATDL*

>peptide 5 (39 aa)
GLTAKGGTSSGLTYSFISQFIQICCTAAESSRTQPNIST*

Sequence

>CNT30665960
TAGGCTTAACAGCAAAAGGAGGCACAAGTTCAGGGCTCACTTATTCATTCATTTCACAGTTCATCCAAATCTGCTGCACCGCAGCAGAAAGTTCACGGAC
ACAACCAAACATAAGTACATAACACTAGACCACAGCACGGTAGCAACAAAGCACAAGACCAGACGAGGACACACTGACAATCCGATCGGAGGACACAGAA
AGGCAACCGACTTGTGAGCCCACAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTC
TGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCT
TCGCCTTCACATTGTCAATGGTGTCAGATGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATACCACCCCTGAGACG
GAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCC
GGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCA
CAAAGATCTGCATCTGCAAACATAAAGTGTACCGAAACCATAGTAAGGCACTCGTAATCATGAAACTGCAGAACATAAAGCATATGTGAACAAGAAGGT