Detailed information on CNT30349331


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 3e-78

BLAST vs NONCODE:
NONBNAT005965, E-value = 1e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225078Eragrostis tefHordeum vulgare87.9325.1292.44357forward

Expression of CNT30349331

Peptides detected in this lncRNA

>peptide 1 (98 aa)
LLVRGDALLVLDLGLHVVDGVRALNLQGDGLASQGLHEDLHPTPQAEHQVKGGLLLDVVVSKGTAILELLAGEDEPLLVRGDALLVLDLCLDVVDGVR*

>peptide 2 (49 aa)
CWSGGMPSLSWILAFTLSMVSELSTSRVMVLPVKVFTKICIPPLRRSTR*

>peptide 3 (46 aa)
MSLCWSGGMPSLSWIFALTLSMVSDDSTSRVMVLPVRVFTKICICK*

Sequence

>CNT30349331
CTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCAGTC
AAGGTCTTCACGAAGATCTGCATCCCACCCCTCAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCT
CGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCAGATGACTC
CACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATCTGCAAGTAAGAACAACCAAACCAAGGTCAGGTATCTAGCAGGACCAAT
AAAACT