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Detailed information on CNT30333534


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30207662Cynara cardunculusHelianthus annuus27.45.0988.7580forward

Expression of CNT30333534

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVYASEIFGAPPVLMASLITSNGCLRQWKIYKFKR*

>peptide 2 (45 aa)
GFDVGSISSHNSEFVVSNTEKKLLIQTSIDHPNEFYGSKPLLEQL*

Sequence

>CNT30333534
AGGGTTTGACGTAGGAAGCATCAGCTCCCACAACAGTGAGTTTGTGGTTAGCAATACTGAAAAAAAGCTGTTGATTCAGACCAGCATTGATCACCCTAAT
GAGTTCTATGGAAGCAAACCTTTGCTGGAGCAGTTATAGAGGTCACCAGGTTGACCATTGATGGTATATGCATCAGAAATATTTGGAGCTCCTCCGGTTC
TCATGGCTTCCCTTATAACATCCAACGGATGCCTACGACAATGGAAAATCTACAAATTCAAGAGATGACACCCGTATAACGTCAGATGGGAG