« Back to Helianthus annuus search


Detailed information on CNT30205024


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500604Helianthus annuusCoffea canephora86.9892.3679.4568forward
CNT3042412Helianthus annuusPrunus dulcis68.360.1980.04446forward

Expression of CNT30205024

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVKWGCRMGRSGCTLGMSGCMLGMSGCRQET*

Sequence

>CNT30205024
GGGCTATATGGACTTGAAGGTGACAGCCTCGGACTGCTAGGGGAATAAGCAAGAGAGGGGCTGTACTTGGCAGATGACGGATTGTAACTTGGTGAGGTTG
GGCTGTAGCTTGGTGAAGTTGGGCTGTAGCTAGGCGAAGTTGGACTGTAGCCAGGAGAAGTCGGGCTGTAAGCAGGTGAGGTGGGGCTGTAGGATGGAGA
GGTGGGGCTGTATGATGGGGAGGTAGGGCTGTAGGATGGTGAAGTGGGGCTGTAGGATGGGGAGGTCGGGCTGTACGCTGGGGATGTCGGGCTGTATGCT
GGGGATGTCGGGCTGTAGGCAGGAGACGTAGGGCTGTAACTAGGTGATGTGGGGCTATAACTAGGTGACGTGGGTGAGTAACTGGGAGATGTGGGGGAGT
AGCTAGGTGAGGTGGGAGAATAGCTGGGAGAAGTCGGGGAGTACGTAGGACTGGTTGGACTATAGCCAGGGGAACTTGGACTATACGTTGGTGAAGTGGG
ACTATAACCAGGTGATGTAGGGCTATAGCCAGGAGACGAAGGGCTGTAACCTGGAGAAGAGGGACTGTATCCAGGTGAAGAAGCCGGAGAAAAGCCCATC
CCGCCAACATAAGGTGAAAACTGTGCATCGTTAAACGGTGACAATCTTAGATT