« Back to Pisum sativum search


Detailed information on CNT30201763


BLAST search results

BLAST vs Swiss-Prot:
sp|P08215|ATPA_PEA, E-value = 1e-120

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30364932Pisum sativumSorghum bicolor54.1845.0885.91298forward
CNT30103672Pisum sativumOryza rufipogon51.4532.4285.87283forward

Expression of CNT30201763

Peptides detected in this lncRNA

>peptide 1 (39 aa)
KDANVNKKHLRDKLRDLVVFVIEETFGDKHVRVWRDHHK*

Sequence

>CNT30201763
CAAAAGACGCGAATGTAAATAAAAAACATCTCCGGGATAAGCTTCGCGACCTGGTGGTCTTCGTAATAGAAGAGACATTTGGCGATAAGCATGTGCGTGT
TTGGAGGGATCATCATAAATAATTAAAGTGTGACGTTCATGGTACATAAAATATTCAGCCAGAGCTGCTCCTGTATAAGGCGCGAGGTATTGTAATGTAG
CTGGGGAATTTGCTGTTTCAGCCACTATAATAGTGTATTCCATTGCTCCTCTTTCTTGTAAAGTAGTTACTACTTGAGCCACAGAAGATGCTTTTTTACC
AATAGCTACATAAACACATACTACATTTTGTCCCTGTTGATTGAGAATCGTATCTGTAGCTACTGCTGTTTTACCTGTTTGTCTGTCCCCAATAATCAAT
TCTCGCTGGCCACGCCCTATAGGGACCATAGAATCAATAGCAATAAGTCCTGTTTGAAGAGGCTCATACACGGAACGTCTGGAAATAATACCGGGAGCGG
GAGATTCAATTAACCGAGATTCCGAAGTTGAAATTTCTCCTCGACCGTCA