Detailed information on CNT30201714


BLAST search results

BLAST vs Swiss-Prot:
sp|O98679|NDHK_PEA, E-value = 8e-66

BLAST vs NONCODE:
NONCQUT007113, E-value = 4e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30506141Pisum sativumNicotiana attenuata30.469.286.9692forward
CNT30232585Pisum sativumAnanas comosus38.4134.0293.97116forward
CNT30353934Pisum sativumEragrostis tef86.0941.6788.85260forward

Expression of CNT30201714

Peptides detected in this lncRNA

>peptide 1 (44 aa)
PILSLITNWIFIDFSRYFLTKFCYSIYNSFRFRWTAWQIDIHRN*

Sequence

>CNT30201714
AGCCTATTCTCTCGTTGATAACTAATTGGATCTTCATCGATTTCTCGAGATATTTTCTTACGAAGTTTTGTTATAGCATCTATAACAGCTTCCGGTTTAG
GTGGACAGCCTGGCAAATAGACATCCACAGGAATTAGCTTATCCACGCCCCGAACAGTACTATAAGAATCGGTACTGAACATACCTCCTGTAATTGTACG
GGCTCCCATAGCAATAACATATTTTGGTTCGGGCATTTGCTCATATAATCGAACTAAAGAAGGAGCCATTTTCATAGTTACGGTGCCCGCTGTTAAAATG
AG