« Back to Nicotiana attenuata search


Detailed information on CNT30506141


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201714Nicotiana attenuataPisum sativum9.230.4686.9692forward
CNT30232585Nicotiana attenuataAnanas comosus9.427.5785.1194forward

Expression of CNT30506141

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MQGIWNPISLQCRILEVLPNSIVTKLFIS*

>peptide 2 (29 aa)
MLKYSYFDFNFWKHGASVVGFKLTELINW*

>peptide 3 (54 aa)
IHPKSTGHDHNVRQYTSKYAYIKPNINFLMKFCYSIYNRFRFRWATWQIYICSN*

Sequence

>CNT30506141
TATACATCCAAAATCAACGGGACATGATCATAATGTGAGGCAATATACATCAAAATATGCATACATTAAGCCGAATATCAATTTTCTTATGAAATTTTGT
TATAGCATCTATAACCGCTTTCGATTTAGGTGGGCAACGTGGCAAATATACATCTGCAGTAATTAGCTTATCGACTCAGTTCTTTCTCCGGATTTTGTTA
CCTCCTCAATTCCTCTTCCAGTTTACTTTGTCTCTTTCAGTCTTCCCTCTTTATCTACTTTGCTAATTCTGTGTTTCTTCTTGATTTAGTTCTTACTTCT
GGGTTGTTGCTTTTTCCAATTTCCATGCGCTTTATCCCTGCTTTTTACTAGTTGATGTAAAATATCATAGTTGCTATCCAATTAATCATAGCTTATGATC
CTTTTAATTTCTGAACACAAAGGAGCTATGAGACAAAGGGACTACGCTTAATCTGTATATACTACTGAGGAGCCTTAGCGCAATAGTAGAAGTTTCTACC
ATGTGATCAGGAGGTCGTGAGTTTAAATCGTGGGACCAATCTCTTAAAAATATGCAAGGAATATGGAACCCCATTTCTCTGCAGTGCCGAATATTAGAGG
TACTCCCTAATTCAATAGTGACTAAACTCTTCATTTCTTAGCATCAGTATTGTGCAAATCTGCAGATCGTTTATGCATTTTCTGAAATTGAACTTAATTT
TGGTCTGATAATCAACATTTGGTTTTTTTAATGGATACTATAAGCAGTAGGGCTGGGTTGATGTTGATTTTTAATTTACCTAAGCCCGTCGAATGTTGAA
GTATAGCTATTTTGACTTTAACTTCTGGAAACATGGTGCATCAGTTGTAGGATTTAAACTGACTGAGCTAATTAATTGGTAATTACTATAATTCGGCCTA
TTCTTTCAATCTTGAAAATGCTTCCCAAAGTTTAGTCTTGCTTTGCATCTTCTACCAAAAGGATTCTGATAAACTTTTAAACTTCTCATGTTTATATGGC