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Detailed information on CNT30194413


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30384070Secale cerealeTriticum turgidum28.1820.9293.29164reverse complement
CNT30656858Secale cerealeTriticum dicoccoides25.2618.891.84147reverse complement

Expression of CNT30194413

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MAGFICLGRRPWVDLTCPWTDSSAWEEGILLRHGRAASGINGGSGGRGGR*

>peptide 2 (30 aa)
PPARLLEMLTACCKQPWPDSSAWGGGHGWI*

>peptide 3 (52 aa)
PLQGCLRCSLLAASNHGRIHLLGAEAMGGFDLSMDGFICLGGGDSFASWASC*

Sequence

>CNT30194413
ACCCCCTGCAAGGCTGCTTGAGATGCTCACTGCTTGCTGCAAGCAACCATGGCCGGATTCATCTGCTTGGGGCGGAGGCCATGGGTGGATTTGACCTGTC
CATGGACGGATTCATCTGCTTGGGAGGAGGGGATTCTTTTGCGTCATGGGCGAGCTGCTAGCGGCATCAACGGGGGCAGCGGTGGCCGTGGTGGGCGGTG
ACGGACGGTGACATCGGCCGGCGGTGGCGAAAGGAGGGCAAGCTGAGGGAAGGAAACAGAGACCTCGAGGGAAGTCGGCCCATACTAGTGCTGGGATTCG
TGCTACCCAAATACTCCCTCCGTTCCTAAATATTTGTCTTTCTAGATATTTCAAATGGTTACAACATACGGATGTATGTAGACATATTTTTTAGTGTAGA
TTTACTCATTTTGCTTCGTATGTAGTCACTTGTTGAAATTCCTAGAAAGACAAATATTTAGGAACGGAGGGAGTATATATTATTATTATTTTCAGGAACA
CGCATGAGCGGATGAGCCTACCCATATATTCCCTCCGTCGCATACTGTAGGACCTTTTTTGACACAGTAAATTGAAGAAGAG