Detailed information on CNT30188086


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 5e-143

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300930Secale cerealeTriticum aestivum70.1268.193.12683forward
CNT30149090Secale cerealeBrachypodium distachyon54.5254.4187.57531forward

Expression of CNT30188086

Peptides detected in this lncRNA

>peptide 1 (29 aa)
CIPVKRVTQSSILLLGSKVNIRHFCCPVF*

>peptide 2 (29 aa)
MAQRQWITSSSRFLAKVSGSADSPAVSQP*

>peptide 3 (68 aa)
MRTTYLFKNISFCTESSQFFSQSNPRNLHHGITTQTAQRHTSPQARAYTHTHLICRERSWWRMPMRCC*

>peptide 4 (70 aa)
MVLQLRPHNDILHHKRVHTHIHTLFAGNEVGGECPCVVVDGVGKVVSEVLEWTLASDDGLHKETEHGEHG*

>peptide 5 (43 aa)
MACTKKPNMENMARRPFLTSFTLSSANASGSSARPSGSKLPPG*

>peptide 6 (38 aa)
MPQGRRQGRADQSYRPGRVGRRSHRVVHRQCGSPRRRP*

Sequence

>CNT30188086
ATGCATTCCTGTGAAGCGCGTAACCCAATCATCTATCTTGCTTTTAGGCAGTAAAGTAAACATTCGTCATTTTTGTTGCCCAGTATTTTGACCGAAGGCC
TGAACAACACCTCAGCCATCAACAAATTTGCCAATAAGGTCTGTCTTCTCAGTGCAGGCCTGCAAATTTACCGATGTATATGATGCATAAGTTGCCGTTG
CCCGGGCCATGCTAATGGCGTTAACCAAATGCGAACAACATATTTGTTCAAAAACATAAGCTTTTGCACAGAATCCTCGCAATTTTTCAGCCAATCGAAT
CCTCGTAATTTACATCATGGTATTACAACTCAGACCGCACAACGACATACTTCACCACAAGCGCGTGCATACACACATACACACCTTATTTGCCGGGAAC
GAAGTTGGTGGCGAATGCCCATGCGTTGTTGTTGACGGGGTCGGAAAGGTGGTCAGCGAGGTTCTCGAGTGGACCCTTGCCAGTGACGATGGCTTGCACA
AAGAAACCGAACATGGAGAACATGGCTAGGCGACCGTTCTTGACCTCCTTCACCTTGAGCTCGGCGAATGCCTCAGGGTCGTCGGCAAGGCCGAGCGGAT
CAAAGCTACCGCCCGGGTAGAGTGGGTCGACGATCTCACCGAGTGGTCCACCGGCAATGCGGTAGCCCTCGACGGCGCCCATGAGCACGACCTGACAAGC
CCAGATGGCAAGGATGCTTTGCGCGTGCACAAGGCTTGGGTTGCCGAGGTAGTCGAGTCCACCCTCGCTGAAGATCTGGGATCCGGCCTTGAACCAAACG
GCCTCGCCAAACTTAACGCCGTTGCGGGCAAGCAGCTCGGGGAAGACGCAACCAAGTGCGCCAAGCATGGCCCAGCGGCAGTGGATCACCTCCAGCTCAC
GGTTCTTGGCAAAGGTCTCGGGGTCGGCCGACAGCCCAGCGGTGTCCCAGCCGTAGTCGCCAGGGAACTCACCA