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Detailed information on CNT30149090


BLAST search results

BLAST vs Swiss-Prot:
sp|P06671|CB22_MAIZE, E-value = 1e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30188086Brachypodium distachyonSecale cereale54.4154.5287.57531forward
CNT30285424Brachypodium distachyonTriticum aestivum42.6258.4390.14416forward
CNT30224420Brachypodium distachyonHordeum vulgare45.085086.36440forward
CNT30393321Brachypodium distachyonTriticum turgidum54.148.487.12528forward
CNT30443381Brachypodium distachyonAegilops tauschii52.565387.13513forward
CNT30668524Brachypodium distachyonTriticum dicoccoides52.5657.0688.5513forward
CNT30455809Brachypodium distachyonSaccharum spontaneum52.5647.1187.91513forward
CNT30137839Brachypodium distachyonLolium perenne52.1566.4586.25509forward
CNT3011673Brachypodium distachyonZea mays42.2152.8988.11412forward
CNT30684671Brachypodium distachyonTriticum urartu39.9640.2190390forward
CNT30345522Brachypodium distachyonEragrostis tef52.5651.6688.89513forward
CNT30582321Brachypodium distachyonEchinochloa crusgalli42.7343.890.17417forward

Expression of CNT30149090

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPLGHQPSRVGRSYCRGREGQRSHQAGHRQHGIPQRCP*

>peptide 2 (39 aa)
MAHLQWITSSSRFLAKVEEERAMVAVAIDVLLYRALLRV*

>peptide 3 (40 aa)
LIKGVAAAEAARLLEANAALRDAAVECNKAGMLAVLEEYM*

>peptide 4 (65 aa)
MTAYLPGMKLVAKAQGLLLTGSARWSARFSSRPLPVTMACTKKPNMENSKAAILELLYLELGECL*

>peptide 5 (75 aa)
MDKARVAEVVEAALAEDLGAGLEPDGLAKLDAVAGKQLGEDATERAEHGPPAVDHLQLPVLGEGRGGEGHGGGRH*

Sequence

>CNT30149090
GCTGATCAAGGGCGTGGCCGCGGCGGAAGCGGCGAGGCTGCTTGAGGCGAACGCCGCGTTGAGGGATGCGGCAGTGGAGTGCAACAAGGCGGGCATGCTA
GCGGTATTGGAGGAGTACATGTAAATATGAGTTGCCGATAGTTTGATCACTGATTGGTGTAGCATTTGTGCGCAATAGATGCACGACATCACAAAGTGGC
CTTCTTCAAAATCGATCAAATTTTTTCATACGATCCTTGTAATTCACATCTCGTGGTAGTACAATTGAAACCAACTACACACTTCATGGCGAGCATGGTT
GATCTCAAAGCCACCCACAGCTCCTAGGTGTGGCTCTCGATGACGGCCTATTTGCCAGGAATGAAATTGGTGGCGAAGGCCCAGGGGTTGTTGTTGACGG
GGTCAGCAAGGTGGTCAGCGAGGTTCTCGAGCAGGCCTTTGCCTGTGACGATGGCCTGTACGAAGAAGCCGAACATGGAAAACAGCAAGGCGGCCATTCT
TGAGCTCCTTTACCTTGAGCTCGGCGAATGCCTCTAGGTCATCAGCCAAGCCGAGTGGGTCGAAGCTACTGCCGGGGTAGAGAGGGTCAACGATCTCACC
AAGCGGGCCACCGGCAACACGGTATCCCTCAACGGTGCCCATGAGCACAACCTGGCAAGCCCATATGGCCAGGATGCTCTGCGCATGGACAAGGCTCGGG
TTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCAAACTTGACGCCGTTGCGGGCAAGCAGCTCGG
GGAAGACGCAACCGAGCGCGCCGAGCATGGCCCACCTGCAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCGAGGAGGAGAGGGCCATGGTGGC
GGTCGCCATTGATGTACTGCTGTACCGTGCTCTCCTAAGAGTGTGAGGCTGGCTCTGGTGTGCGTGGAGATGGTTT