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Detailed information on CNT30632051


BLAST search results

BLAST vs Swiss-Prot:
sp|O24370|LOX21_SOLTU, E-value = 8e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3084419Vigna unguiculataVigna radiata17.334.3790.98122forward
CNT30175788Vigna unguiculataVigna angularis52.0635.2294.82367forward

Expression of CNT30632051

Peptides detected in this lncRNA

>peptide 1 (52 aa)
FRFFFVRSAFLSSMVPSSSFNLPLNFSNAAFTRGSCSHAGSTEVPIYSSSGE*

>peptide 2 (41 aa)
PVLLRQIRIPLIDGPFKLIQSPFELLKRRLHTWLLLPRRLH*

>peptide 3 (29 aa)
MVVTTSTRLGALCLIEQRWSRRSSGRCIR*

Sequence

>CNT30632051
TTCCGGTTCTTCTTCGTCAGATCCGCATTCCTCTCATCGATGGTCCCTTCAAGCTCATTCAATCTCCCTTTGAACTTCTCAAACGCCGCCTTCACACGTG
GCTCCTGCTCCCACGCCGGCTCCACTGAGGTCCCGATATACTCCTCGTCCGGCGAGTGATTCGACAGAACGTCCAGCACCGTAATCACCGTGGTGGCCTG
ATACTGCGACGGGAAACACTTCAACATAGTCACCTCCGGTTTCTGCAAGAACAGCTCCCACTCCGGGTCCGAAGGGTCCTCTAAGGGCAAGTTGGTACGC
GCAATGGTTGGCCTGTTGGGGAAATAGCCGGCGAAGGAGAATTGTCCGAAGTTCACAGCAGCATGGTGGCCCGAAGTTGTCCACGCAATGGTCGTCACGA
CTTCAACGAGGCTTGGAGCTCTGTGTCTGATTGAACAGCGTTGGAGTCGGCGTAGTAGTGGTCGATGTATTCGGTGAACCACGATTTGAAAGCCGCCCAG
AGGTCGAGGCCGTCGTTGGCGTAAGGGTAGTCTTCGATGGTGAGTTTGAGGCCGTGAGGGGCGGTGGGGTCCTCCACGGCCAAGCCCCTGTGGATGAGGT
CCTTGGGGAGGGATTGGAGATCAAATCGCCAGTGTTTGTCATAGGCGATTGAGCTTAGCAGAACGGAGTGTTTCTGCGGAGTAAAACACTGCTCTATTAT
TCCGC