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Detailed information on CNT30169896


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 6e-153

BLAST vs NONCODE:
NONGMAT000502, E-value = 2e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381863Pistacia veraManihot esculenta42.572.1285.36683forward
CNT30334113Pistacia veraCynara cardunculus42.537.8683.46683forward

Expression of CNT30169896

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTRWSVDSFWML*

Sequence

>CNT30169896
GGGATGGTCATACATAACTAACTTATTTTGCAATTACCTTCTTTCAAGTTTAATTCTATCCTGTACTAATTGGAAACCAATTGAGTAACACCTCCCTTGT
AGGGACCTAATTTTCTCCATCTAACTTTACTAAAGCCATAATACTCTGCAATGATTTTCCTCATCTAAATATGCGAAAGCCATAAATACTGTTAGGCACC
GTACTCTTAATCAAACGAAGCCCACATTTTGAATCATATATAAACCACGAAAGCATTGCGAAAACCAACATTTAAAAGAAGAGAATGTTGGGCAGGTGGA
CTTGATGAAAACACAAAACATCCGGCTTCAAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACT
GCACACTTGACTTGACAGCAATCAGAGAACCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCT
ACCCAACAGATAGAAGGGTTTTCTTCATCTTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAAC
ACTTTTTAACTGAACCGTTCAACCGAGAAACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACT
GAAACTGGTCTCAACTTCATGACCAGGAAATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCA
CTTAGAATTCACCACCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGGGTACGCCCATCCTCCAGCTGCTTCCC
AGCGAAGATAAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATCGTATCAGAACTCTCCACCTCCAGAGTT
ATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCATACCTCCACGAAGCCTCAGCACCAGATGGAGAGTCGACTCCTTTTGAATGTTATAGTCGGCCA
AGGTTCGTCCGTCTTCTAATTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTATCGAT
GGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTACCGGTGAGAGTCTTGACAAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGATGGAGTGTT
GACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTGT
CTTGAATCTTGGCCTTGACGTTATCGATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTTGAG
AAGATTGTTGTTGAAACTTGAAATAGAGAAATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGAGGAAGGGTGTTTATATAAGAGAAAATGC
CGACTTG