Detailed information on CNT30165777


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404377Pistacia veraBeta vulgaris42.0130.8781.82121forward
CNT3024414Pistacia veraPopulus trichocarpa68.7564.9282.32198forward

Expression of CNT30165777

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MISTLSFFHIATHEYVVPRSIPIAGPSSFAAIISKRLLFNQKKIKKKIESQRNMYY

>peptide 2 (52 aa)
INGVLGVHVNLVLCSFANKTLLISKRHIRRRRPVALIISYDLHSVILPHSHA*

Sequence

>CNT30165777
CATAAACGGTGTTCTTGGAGTTCATGTCAACCTGGTTCTTTGCAGCTTCGCCAATAAAACGCTCCTTATCAGTAAACGCCACATAAGACGGCGTCGTCCT
GTTGCCTTGATCATTAGCTATGATCTCCACTCTGTCATTCTTCCACATAGCCACGCATGAGTATGTAGTCCCTAGATCAATTCCGATTGCAGGTCCCTCT
TCCTTTGCAGCCATTATTTCTAAGAGATTGCTCTTTAATCAGAAGAAAATTAAGAAGAAAATAGAAAGTCAAAGAAATATGTATTACT