Detailed information on CNT30162463


BLAST search results

BLAST vs Swiss-Prot:
sp|P19142|PAL2_PHAVU, E-value = 2e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628398Pistacia veraVigna unguiculata60.088.1983.23155forward
CNT3096548Pistacia veraSolanum tuberosum27.5210.2592.9671forward
CNT3023983Pistacia veraPopulus trichocarpa69.3817.3184.92179forward

Expression of CNT30162463

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MTSPLGSVAFELGRPVSNPAMYDRGTRSPEAVIVPRSGRHGVILLLRRLVIASKISNLIPE*

Sequence

>CNT30162463
CGGCGAGTTTAGAGGCTTCTTGAGCATTAATGACTTCTCCCTTAGGTTCCGTGGCCTTTGAATTGGGGCGACCGGTAAGTAATCCGGCAATGTATGACAG
AGGAACTAGATCACCGGAGGCAGTGATTGTGCCGCGAAGTGGGAGGCATGGAGTAATTTTGTTATTGAGAAGACTGGTAATTGCTTCCAAGATTTCAAAT
CTGATTCCAGAGTAGCCCTGGAGAAGAGTGTTGATCCTAACAAGCATGGCGGCTCTTG