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Detailed information on CNT30161790


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30488794Pistacia veraOlea europaea5.5932.7287.3271forward
CNT30153780Pistacia veraPrunus persica15.2621.6880.41194forward

Expression of CNT30161790

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MSAQSSEKQTNITTPIRTEISNFSSTKNVPLVTTLVNPES*

>peptide 2 (65 aa)
MIMFVSLKTLHDFVGCFPKNSHRIENEVFTLYMLDLELVPIFKKDLIVSLYIFGMEYLHNPHDLD*

Sequence

>CNT30161790
GTATGCTTGGTCGATTAAAATTTCTGCACATGAATATTCATTTTGATTGTCTGTTTTGATTGAATATCCATATCTCATATGATTATGTTTGTTTCACTTA
AAACTCTTCATGATTTTGTTGGATGCTTTCCTAAAAATTCTCACAGAATCGAGAATGAGGTTTTCACTTTGTACATGTTAGATCTTGAATTAGTACCGAT
CTTCAAAAAAGACCTAATTGTTTCACTTTATATTTTTGGAATGGAATATTTACATAATCCCCATGATTTAGATTAAATGTTATTTCATGGTATTTGTATG
AGATTCCTCCTTTTTTTTTTTTAAGCAAGTGCTTGAGAGGGTTTAATTGAATTGATCTATGAATTATGTTTCATTTTCCGTTTCCTTTATGTACTAAGGC
ACTTGTTTTTTGTTGATATTGAATAAGTGCACATATGATGTGGTCTTTATGATACTGTTAAACGAGTGTATAAATAATATGATACAATCATTTTACAGAA
GAGCATATCACTTCATTTGTATGCCCATCTAAGAGAATAAACAAACAAATTTGGGCAGCAAGAGCTGCACTTGATTTGGGCAATCCACCAAGATCGGCTT
TGATGGGGCAAAAAGGCACTCAGATTTATGTTGCACGGTGAAACTTCAACCTTTAAACAAACAAATCTTGTATTGAAGTAATGTCTCTTGCTTGGAATGA
ACAAACTTGATCAATGTCAGCCCAGTCCAGCGAAAAACAAACAAACATCACAACACCAATACGCACTGAAATAAGCAATTTCTCCAGTACAAAAAATGTA
CCATTGGTTACAACTTTGGTGAATCCAGAATCATAAACCGGACTTTAAAATTAATGTTGCCTTTGCTCAAGTGACTAAACAGTGGGAAAAAGCACTTATC
TATAAATATGGTCTTTCTTGCTTCTAATAATCAGTTTATGTAAACTTTAGATCTTCTTCTTCTTTTCCTGAGGGTGGGGGGTTGCATAAGAACTTGCAAT
GTGGCAATAGGTTACCTTTTTTTTTTTTTTTTTCCTTCTTTAAAGTGTTAATACTATTATTTTAATTTGAAATTTTTGCAGATCTACTTGAAGTTTGATT
AGTCTTCTGGAGATCTAGCCCGTGTTGAACTTCTCTCTGAACTTTCTATACCGAGTTTCCTGTATCAAGTGATCTGTGGCTTGATTATATTCACTATTTG
GATAAAACCTTGAAGGTTTCACTCATATTTTCTCTTTTCAATTCTTTATGTTTCAAGTATTTATAATTTTA