Detailed information on CNT30488794


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690671Olea europaeaOryza sativa65.447.797.18142forward
CNT30617122Olea europaeaSesamum indicum24.8824.6698.1554reverse complement
CNT3021542Olea europaeaCitrullus lanatus29.9510.9198.4665forward
CNT30502479Olea europaeaNicotiana attenuata54.3814.2988.98118reverse complement
CNT30161790Olea europaeaPistacia vera32.725.5987.3271forward
CNT30637929Olea europaeaCapsicum annuum37.792.8797.5682reverse complement
CNT3093184Olea europaeaSolanum tuberosum40.559.2290.9188forward
CNT30300194Olea europaeaTriticum aestivum65.446.7597.18142forward
CNT30556129Olea europaeaOryza glaberrima54.8426.9896.64119reverse complement
CNT3059312Olea europaeaArabidopsis lyrata65.4425.9198.59142forward
CNT30623007Olea europaeaDaucus carota88.9441.4297.93193forward
CNT30153780Olea europaeaPrunus persica64.9815.7599.29141forward
CNT30150988Olea europaeaBrachypodium distachyon60.837.5696.21132forward
CNT3099667Olea europaeaOryza rufipogon65.446.1995.77142forward
CNT30114021Olea europaeaFicus carica40.0912.3694.2587forward

Expression of CNT30488794

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKGFHKNSRRIENEVFILYMPDHELVTASNF*

Sequence

>CNT30488794
AAAATCACTCAAAAATTAGGATACATTCTGGGAAAATCAAACTTCCATCGAAGAGAAGCAAATGAAAGGCTTTCATAAAAATTCTCGTAGAATCGAGAAT
GAAGTTTTCATTCTGTACATGCCAGATCATGAATTAGTAACTGCATCCAATTTCTAAAAAAAATCCCAATTGTGTCGAACTTTCCATTTTTGGAATGGAA
TAGGATCAAGATCAAAC