Detailed information on CNT30153780


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09WV9|RR7_MORIN, E-value = 3e-66

BLAST vs NONCODE:
NONCQUT001706, E-value = 1e-116

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677883Prunus persicaSetaria viridis60.6736.3986.92543forward
CNT30617775Prunus persicaSesamum indicum40.4554.6893.65362forward
CNT30730546Prunus persicaCorchorus capsularis24.837.5696.4222forward
CNT30198866Prunus persicaPisum sativum33.0790.892.57296forward
CNT30488794Prunus persicaOlea europaea21.3488.0295.29191forward
CNT30161790Prunus persicaPistacia vera21.6815.2680.41194forward
CNT30384007Prunus persicaTriticum turgidum28.9429.6786.87259forward
CNT30569656Prunus persicaActinidia chinensis31.8433.8594.74285forward
CNT30543269Prunus persicaBrassica napus68.2720.6495.58611forward
CNT30556129Prunus persicaOryza glaberrima51.73104.9988.55463reverse complement
CNT30136937Prunus persicaLolium perenne40.3457.1287.81361forward
CNT3018230Prunus persicaZea mays39.6649.189.01355forward
CNT30607385Prunus persicaGossypium raimondii21.5618.2887.05193forward
CNT30331679Prunus persicaDioscorea rotundata32.7442.7795.9293forward
CNT30115844Prunus persicaOryza nivara75.4277.587.26675forward
CNT30603929Prunus persicaOryza punctata25.757.6486.52230reverse complement
CNT30111895Prunus persicaFicus carica9.6124.1695.3586forward
CNT30726938Prunus persicaLupinus angustifolius21.995.1591.84196reverse complement
CNT3049028Prunus persicaCucumis sativus20.3462.7696.7182forward

Expression of CNT30153780

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MFRLSFPFRLFREIYRSIPIPSFLLILFRSRCMDPWVYVSI*

>peptide 2 (47 aa)
MCLYRSCSWINENVQKLYLPLPFYESLPFCVWHRHSRWQHPLIRNLI*

>peptide 3 (48 aa)
MYGSMGLCVYIDPVHGLTKMCKSSICLCHSMSLFLFAYGIATPVGSIH*

>peptide 4 (64 aa)
MPLITNEWQVLFLVWILFQWELDESIRLHVLLLLLYRELLHVLLDVKQIVDLFLSFENLFQGSID

>peptide 5 (49 aa)
MASPLPLAASTNSELNLKTIFRPGRFRDAPNNQRMASAFPCVDPISMGT*

>peptide 6 (63 aa)
MKGFHKNSRRIENEVFILYMPDHELVTASNLQKIPILSNFLFLEWNFYGIPMNRIKPYSMVFT*

Sequence

>CNT30153780
GGAACAATAGGGCCGTTATGCTCATTACTAAACTTGTTGAAGAGATGAAATATAACCAAGGTATATCTTTTTGATCAGAGGTTGAATCGATCATCAGAAG
AAGAATTAGGCGAAAAATTAGGATACATTCTGGGAAAATAAAACTTCCATCGAAGAGAAGCAAATGAAAGGCTTTCATAAAAATTCTCGTAGAATCGAGA
ATGAAGTTTTCATTCTGTACATGCCAGATCATGAATTAGTAACTGCATCCAATCTCCAAAAAATCCCAATTCTTTCGAACTTTCTCTTTTTGGAATGGAA
TTTTTACGGAATCCCCATGAATAGGATCAAACCTTATTCCATGGTATTTACATGAGATTCCTCTTTCTTATTCTTAAACAAGTCCCCGAGAGGGCTTAGT
TGATCCACGATTTATGTTTCGTCTTTCGTTTCCTTTTCGTTTGTTTCGAGAAATATATCGATCAATTCCGATTCCTTCTTTTCTATTGATTCTTTTCCGA
TCGAGATGTATGGATCCATGGGTCTATGTGTCTATATAGATCCTGTTCATGGATTAACGAAAATGTGCAAAAGCTCTATTTGCCTCTGCCATTCTATGAG
TCTCTTCCTTTTTGCGTATGGCATCGCCACTCCCGTTGGCAGCATCCACTAATTCGGAACTTAATTTGAAAACCATATTTCGACCTGGACGTTTTCGAGA
TGCCCCTAATAACCAACGAATGGCAAGTGCTTTTCCTTGTGTGGATCCTATTTCAATGGGAACTTGATGAGTCGATCCGCCTACACGTCTTGCTTTTACT
GCTATATCGGGAGTTACTCCACGTATTGCTTGACGTAAAACAGATAGTGGATTTGTTTCTGTCTTTTGAGAATCTTTTTCAGGGCTCGATAGATA