Detailed information on CNT30158975


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499557Pistacia veraCoffea canephora28.6132.984.16101forward
CNT30381752Pistacia veraManihot esculenta24.6528.4388.5187reverse complement
CNT3061339Pistacia veraArabidopsis lyrata23.5127.1285.5483reverse complement
CNT30174902Pistacia veraVigna angularis22.3825.988.6179reverse complement

Expression of CNT30158975

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MKLKKKKKQKKVVVQLSWAFRALISMMGTDSLSIH*

Sequence

>CNT30158975
CCTGTTATAGAGTAAAATATCAAATGAGATAGATGAAATTAAAAAAAAAAAAAAAACAGAAAAAAGTGGTTGTCCAATTGAGTTGGGCTTTCCGGGCATT
GATAAGCATGATGGGAACCGACTCGTTATCCATCCACTGACAAGAGCGGGAGGTAGTCGCTGCTCTGTGACCAGCCTCACGCTGTATCCTCCACTTTAGG
AACCATATGGTCCAGACCTTCGCCCAGCCCACGAGGTTCAACTCTCTACTTGGATTGGGCGAGCCAATATACGACCCAGCAAACCCAACCTGAGAAGCCC
AGCCAGCGTCCAACCACTTTAATGCCCCACTTGGTTACAGGCCCTCGTTGCTG