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Detailed information on CNT30150536


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30364191Brachypodium distachyonSorghum bicolor21.1823.3285.59111forward
CNT30556378Brachypodium distachyonPanicum hallii22.916.7185120forward

Expression of CNT30150536

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MPLPVSREARPCCTWILFPNPNPTYNNATMLPDLGSRNQMEMLLGMPLPVTPGPENGLSSS*

>peptide 2 (31 aa)
MVPSTSFSLPLNFSNAALTMGSAGAPPPAWP*

>peptide 3 (29 aa)
MNFLISSSLFSSTGMFFRTTVGRFGKYPP*

Sequence

>CNT30150536
ATCTTCATTACCAATTAATGGCATTCTAGTGGCTGAAACATACTAGCGGTAGCAGATGCCTCTCCCGGTGTCACGGGAGGCACGTCCATGTTGTACATGG
ATCTTATTCCCAAATCCCAATCCTACATACAACAATGCAACGATGCTCCCTGATCTTGGAAGCCGGAATCAGATGGAGATGCTGTTGGGGATGCCCCTAC
CGGTGACCCCTGGCCCTGAGAACGGCTTGAGCAGCTCGTAGGGCACGATCCCCGCGCCGCACCTGTTCTTGTTGTCCGTGTTGTTGTTCCGCTCGTCGAT
GGTGCCTTCCACCTCCTTTAGCCTGCCGCTGAACTTCTCGAACGCTGCCTTGACCATGGGCTCTGCAGGAGCACCTCCTCCGGCCTGGCCATGAACTTCC
TCATCTCGTCCTCCTTGTTCTCCTCCACCGGTATGTTCTTCCGCACCACCGTGGGCCGGTTTGGGAAGTACCCCCCGTAGTGGTACTGTCCGAAGTTGAC
GGCGGCGTGGTGCCCTGACGTGAC