Detailed information on CNT30364191


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30150536Sorghum bicolorBrachypodium distachyon23.3221.1885.59111forward

Expression of CNT30364191

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MTSDRDAVGDAPPGDSRLGEGLEQLVRHDPGSKPVLVLRDLLGDGGLRRTVHLLVQLAPDGELPQELDAHRVQPRDRLPRELLVFEPR

>peptide 2 (77 aa)
MPLPVTPGLEKGLSSSYGTIPAPNRFLFSGISLVMADSAGPYTSSSSLLLMGNSLRSWMHTGFSPAIVCLANSSSLNH

>peptide 3 (63 aa)
NGSNSSVQSMVQYNRRSEYILFDKQPLHAIMQPPIGSRAFFFFFLFELIGDGAERLLSLIPRN*

>peptide 4 (29 aa)
MVVTQVYNPWYNTIVDQSTFYLTSSLCMQ*

Sequence

>CNT30364191
AAATGGTAGTAACTCAAGTGTACAATCCATGGTACAATACAATCGTAGATCAGAGTACATTTTATTTGACAAGCAGCCTCTGCATGCAATAATGCAACCT
CCCATTGGGAGTAGAGCTTTTTTTTTCTTTTTTCTTTTTGAACTTATTGGGGATGGAGCTGAGAGACTGTTGAGCCTGATACCAAGAAACTAATGCTGAG
GATGAGGTCTCGATGACATCAGATAGAGATGCTGTAGGGGATGCCCCTCCCGGTGACTCCCGGCTTGGAGAAGGGCTTGAGCAGCTCGTACGGCACGATC
CCGGCTCCAAACCGGTTCTTGTTCTCCGGGATCTCCTTGGTGATGGCGGACTCCGCCGGACCGTACACCTCCTCGTCCAGCTTGCTCCTGATGGGGAACT
CCCTCAGGAGCTGGATGCACACCGGGTTCAGCCCCGCGATCGTCTGCCTCGCGAACTCCTCGTCTTTGAACCACGA