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Detailed information on CNT30148462


BLAST search results

BLAST vs Swiss-Prot:
sp|Q5NUF4|HIDM_GLYEC, E-value = 6e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521778Brachypodium distachyonSetaria italica26.716.3690.57106forward
CNT30351903Brachypodium distachyonEragrostis tef35.2619.6190.71140forward
CNT30593433Brachypodium distachyonEragrostis curvula33.2524.4490.91132forward

Expression of CNT30148462

Peptides detected in this lncRNA

>peptide 1 (49 aa)
DEQQTTGEFSQAQTWPNLRVTGMKLFLHGAHLPFPCRLARAAALTCGGS*

>peptide 2 (53 aa)
MAQSQSHRHEIIPSRGTPSISLQARSRSRSHLRRKLRMRSCISTVFSERGFMQ*

Sequence

>CNT30148462
TGACGAACAACAAACTACGGGGGAGTTCTCCCAGGCTCAAACATGGCCCAATCTCAGAGTCACAGGCATGAAATTATTCCTTCACGGGGCACACCTTCCA
TTTCCTTGCAGGCTCGCTCGCGCAGCCGCTCTCACTTGCGGAGGAAGCTGAGGATGCGTTCCTGCATCTCGACTGTTTTCTCGGAGCGCGGGTTCATGCA
GTAGAAGACGTGCCCTTCGCCCATGGACTCGAGCAGCTCCACCTGGCCGCCGTAGCCGCTGGCCTTGAGGCTCTCGTAGTACCAGACGCCCCTGTCCCGG
AGCCCGTCCTTCTCGGCCACGCAGACGAGCACGCGGTACTCTAGCGCGACCGCCAGGACGTTGGCGGCCGCGACGAGGCCGTTGAGGTAGCCGTGCG