Detailed information on CNT30136407


BLAST search results

BLAST vs Swiss-Prot:
sp|P29114|LOX1_HORVU, E-value = 3e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30454858Lolium perenneSaccharum spontaneum34.940.3183.65104forward
CNT30344859Lolium perenneEragrostis tef94.9742.7583.04283forward
CNT30361402Lolium perenneSorghum bicolor47.995282.52143forward

Expression of CNT30136407

Peptides detected in this lncRNA

>peptide 1 (98 aa)
ELVPPGVANSDVGLGQLPHPAFDAAAGNWRVNFALGGGQAALDERLAQLNGEGCEPSITTQEEEGPGGVDEIAIQVVDVNQKWHEPVVVIQDVELVAFQ

>peptide 2 (43 aa)
RAGATRSRQQRRRPWPAPTPSLRRCRWELACKLCSWRWSGRPG*

Sequence

>CNT30136407
CGAGCTGGTGCCACCCGGAGTCGCCAACAGCGACGTAGGCCTTGGCCAGCTCCCACACCCAGCCTTCGACGCTGCCGCTGGGAACTGGCGTGTAAACTTT
GCTCTTGGCGGTGGTCAGGCCGCCCTGGATGAAAGGCTCGCTCAGCTCAATGGCGAGGGGTGTGAGCCTTCCATCACTACGCAGGAAGAAGAGGGTCCTG
GTGGCGTAGATGAAATTGCCATCCAGGTTGTTGACGTCAATCAGAAATGGCATGAACCGGTCGTGGTGATCCAGGATGTAGAGCTTGTTGCTTTCCAG