Detailed information on CNT30361402


BLAST search results

BLAST vs Swiss-Prot:
sp|P29114|LOX1_HORVU, E-value = 2e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30136407Sorghum bicolorLolium perenne5247.9982.52143forward
CNT304788Sorghum bicolorZea mays30.5519.485.7184forward
CNT30344859Sorghum bicolorEragrostis tef71.2729.6189.8196forward

Expression of CNT30361402

Peptides detected in this lncRNA

>peptide 1 (90 aa)
DGDIGLGELPHPGLDACGRRRVDLALGLGEATVDVRLAELDGERREPAVGAQEEERPGGVDEVALQVLLDVLRRDRAGVVAVLAGVERALR

>peptide 2 (29 aa)
MKLPSRFFSMCSAVIVLVWSPYLLGSSVLF

Sequence

>CNT30361402
TTGACGGCGACATAGGCCTTGGCGAGCTGCCACACCCAGGCCTCGACGCCTGCGGACGCCGGCGTGTAGACCTTGCTCTTGGCCTTGGTGAGGCCACCGT
CGATGTACGGCTCGCTGAGCTCGATGGCGAGCGGCGCGAGCCTGCCGTCGGCGCGCAGGAAGAAGAGCGCCCTGGTGGCGTAGATGAAGTTGCCCTCCAG
GTTCTTCTCGATGTGCTCCGCCGTGATCGTGCTGGTGTGGTCGCCGTACTTGCTGGGGTCGAGCGTGCTCTTCGG