CANTATAdb - search

Detailed information on CNT30101724

BLAST search results

BLAST vs Swiss-Prot:
sp|Q5WMW5|XIP_ORYSJ, E-value = 3e-40

BLAST vs NONCODE: nothing found

Expression of CNT30101724

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MDQGLVNYQPSITEPDPGDQAHYQPSIRSSCPSTCSRP*

>peptide 2 (30 aa)
MARRTRMPLDWQCLMSGPTAETVWPEMSSL*

>peptide 3 (66 aa)
QKKVSLPVLITSLYLCITLHYPTHTHTHTPIFYHIISIFICACTSHDITYFICARTSSSSCMNPVK*

>peptide 4 (46 aa)
PEESKPARPDHLTLFVHYITLSNTHTHTYPNLLSYHFHLYLCMHVT*

Sequence

>CNT30101724
CCAGAAGAAAGTAAGCCTGCCCGTCCTGATCACCTCACTTTATTTGTGCATTACATTACATTATCCAACACACACACACACACATACCCCAATCTTTTAT
CATATCATTTCCATCTTTATTTGTGCATGCACGTCACATGACATTACTTACTTTATTTGTGCACGTACTAGTAGTAGCTCGTGCATGAATCCAGTGAAGT
GATCAGTGATCAAAGTGAAAATGGATCAAGGTCTGGTTAATTACCAGCCGTCCATCACAGAACCTGATCCAGGAGACCAGGCTCATTACCAGCCGTCCAT
CCGGTCTTCTTGTCCCAGTACCTGTTCCAGACCATGATGCCCCCATAGTTGGGCAGCTTGTTGATGAACTGCAGCACGTCGTAGTAGAGATCCTTGTGCG
ACACGTAGCCGTCCCTGTCAGCCTCCGGCGACGCGACGACGCCGACGAGGACGCGGCTCTGCGGGTACGCCGCCATCCACTTCTCCAGCTCCTCCCTCCT
CGACGCGCACCGCCCGTCGCCGAACACCTTGACGTGGATCCGCGAGAAGAGCCCCGTGGACAGCGCCGCCTGCAGCCGCTGGTCCGGGAACACGCACCTC
GCCGTCGGCAGGGAGTACTCGCCGCCCTGGCCGCCGATGGCGAGGAGGACGAGGATGCCCCTGGACTGGCAGTGCTTGATGTCGGGGCCGACGGCGGAGA
CGGTGTGGCCGGAGATGTCCAGCTTGTAGGTGCCCGGGATGTAGCCGAAGGCGCTGAGGAAGGAGATGATGACGGTGGTGTAGAGGCCGGTGTCGCACGC
CTCACGGAGGGACCCCTCGAGCTGGTCCGTGTTCCGGCCCCAGAACACGACGGTGTCGCCG