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Detailed information on CNT30114021


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30488794Ficus caricaOlea europaea12.3640.0994.2587forward
CNT30232463Ficus caricaAnanas comosus8.382588.1459forward

Expression of CNT30114021

Peptides detected in this lncRNA

>peptide 1 (96 aa)
VVFLSPRTANHVADGNTAARRASTVSPFSLSPLSLSTRLIFFTSNFPESITTKTYKSTKLLAGDQKIIHFIPRSTRARPKIGIHSGKIKLPSKRSK*

>peptide 2 (36 aa)
MSMIRWFFSLVICSFCIFNFLVSLILNYSDFWPNGN*

Sequence

>CNT30114021
GTTGTGTTTCTGAGTCCACGCACCGCCAATCACGTTGCTGACGGGAATACAGCCGCGCGGCGCGCGTCCACTGTTTCCCCGTTCTCTCTCTCTCCTCTTT
CTCTCTCTACCAGATTGATTTTCTTTACTTCCAACTTTCCCGAGTCAATCACGACTAAAACTTACAAGTCAACCAAGTTGTTAGCTGGTGACCAAAAGAT
TATTCATTTTATTCCCCGGAGCACAAGAGCTCGGCCAAAAATTGGGATACATTCTGGGAAAATAAAACTTCCATCAAAGAGAAGCAAATGAAAGGCTTTC
AATAAAATTCTCGTAGAATCGACCCCCTTGCTTTTCTCATGTTACAATCCTCTTCCCGCAGAGCCCCCTTTTTCCTCAGTCCACAGAGACAAAATACTAA
ATTATAAACCGGTTCGATCAATTGAATGACTGAATCTTTTGCCCACTCTGAATAAGCAGCATGTCAATGATAAGATGGTTTTTTTCTCTTGTAATATGTT
CCTTTTGTATATTTAATTTCCTTGTAAGCCTCATACTGAATTATTCGGATTTTTGGCCGAATGGAAACTAGATTTTTAATTTGCTGGTATCATTTTCATA
TAAAGTTTTGTTTATATTTTAGTCAGTTTGTAATTAATTAGATTTATGATATTTGTGTGGAGAATTTTTTTTTCCTTGTTTGAATTATTATAGGGTGTTT
GGTG