Detailed information on CNT30111600


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693403Oryza longistaminataOryza sativa33.0335.7890.4173forward
CNT30103721Oryza longistaminataOryza rufipogon92.3152.8599.51204forward
CNT30576995Oryza longistaminataOryza barthii71.0461.5799.36157forward

Expression of CNT30111600

Peptides detected in this lncRNA

>peptide 1 (68 aa)
ALATIVSCDPTRRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVGLEIAWPAIFVDKING*

Sequence

>CNT30111600
TGGCTCTTGCCACTATTGTAAGCTGTGATCCAACACGCAGAGTTGGAGGTGTTGAGCTAGGAAATGAATTTTTAATGGTTCATGTCGATCTTGCATTGGC
AAAATCCGAAGATTTGATTAGGCCATACAAAGGCTACAAAATTGTTGGTCATGTTGTAGGACTTGAAATTGCGTGGCCTGCAATTTTCGTTGACAAGATA
AATGGGTGAAGATGTGGGGGA