Detailed information on CNT30103721


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693514Oryza rufipogonOryza sativa19.6925.5990.7976forward
CNT30111600Oryza rufipogonOryza longistaminata52.8592.3199.51204forward
CNT30576995Oryza rufipogonOryza barthii61.1492.5599.58236forward

Expression of CNT30103721

Peptides detected in this lncRNA

>peptide 1 (39 aa)
ENNNWLCLVFLSFYLVVKLQTMIQIFFIETTVQQNGLYH*

>peptide 2 (93 aa)
MDFITDNSMEVGTKVFLKSWKNRNTNVALATIVSCDPTRRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVGLEIAWPAIFVDKIN

Sequence

>CNT30103721
GAGAACAATAATTGGCTCTGTTTGGTCTTTCTTTCTTTCTATCTTGTGGTTAAATTGCAAACCATGATCCAAATTTTTTTTATAGAAACAACAGTGCAAC
AAAATGGACTTTATCACTGACAATTCAATGGAGGTTGGAACTAAAGTATTCTTAAAAAGTTGGAAAAATCGGAATACAAACGTGGCTCTTGCCACTATTG
TAAGCTGTGATCCAACACGCAGAGTTGGAGGTGTTGAGCTAGGAAATGAATTTTTAATGGTTCATGTCGATCTTGCATTGGCAAAATCCGAAGATTTGAT
TAGGCCATACAAAGGCTACAAAATTGTTGGTCATGTTGTAGGACTTGAAATTGCGTGGCCTGCAATTTTTGTTGACAAGATAAATG