Detailed information on CNT30576995


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30111600Oryza barthiiOryza longistaminata61.5771.0499.36157forward
CNT30103721Oryza barthiiOryza rufipogon92.5561.1499.58236forward

Expression of CNT30576995

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MDFITDNSMEVGTKVFLKSWKNRNTNVALATIVSCDSTRRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVDKING*

Sequence

>CNT30576995
ATGGACTTTATCACTGACAATTCAATGGAGGTTGGAACTAAAGTATTCTTAAAAAGTTGGAAAAATCGGAATACAAACGTGGCTCTTGCCACTATTGTAA
GCTGTGATTCAACACGCAGAGTTGGAGGTGTTGAGCTAGGAAATGAATTTTTAATGGTTCATGTCGATCTTGCATTGGCAAAATCCGAAGATTTGATTAG
GCCATACAAAGGCTACAAAATTGTTGGTCATGTTGTTGACAAGATAAATGGGTGA