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Detailed information on CNT30105279


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553103Oryza longistaminataOryza glaberrima59.571.9291.44479forward
CNT30100591Oryza longistaminataOryza rufipogon104.2296.1187.37839forward

Expression of CNT30105279

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MGRLRLMPRMFRARSVAITPAFVAMPTHRTAPADGLASS*

>peptide 2 (31 aa)
MRSIEYKLINQLCRYTHTRRRMKHALITSWN*

>peptide 3 (66 aa)
MDGAAALVAALEAGRDGAAAVVDEEAEVDGEVEVDAKDVQGQERGDHPSFRRHAHPPHCTCRWPGL*

Sequence

>CNT30105279
CGAACAAGAGCTAGCTAGTACAGTACGTGTAGAACAGGCATGCAGAAAAGACGAGATGCAGTACGTACTGATATGATGCATATACGATGAGATCCATCGA
GTACAAATTAATTAATCAATTATGCAGATACACACATACACGTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCATATGCATGCATATA
TATCTCTTTAATTTACGGGATGAAGGAGGAAATTAAGGCACGCAGATACATATGACGATGATTTGAACAAGGAACAAATTAGACATAGATAGATTGATAT
ATAGTTGTACGTGGCCTGGTGGTCGTTCTTCGTTCTCGTGTGTAGTGAGGAATGGATGGAGCTGCAGCTCTAGTTGCTGCACTGGAAGCCGGAAGGGACG
GAGCGGCCGCAGTAGTTGACGAGGAGGCTGAGGTTGATGGGGAGGTTGAGGTTGATGCCAAGGATGTTCAGGGCCAGGAGCGTGGCGATCACCCCAGCTT
TCGTCGCCATGCCCACCCACCGCACTGCACCTGCAGATGGCCTGGCCTCTAGCTAGCCAGTGTATTCAGATACATCTATCGACCAAGGGGGTGCACTCAT
ATTTATAATAGGATCGATCGGAGGTACTAGCGGAGTACCTTCAATTACTTAACCAGCTACCACATCACTTAACTAACTAATTAATTAATCGAATTTTAAC
TAGGATTTCATCTTAGGTGCAGCTCACATCACTACTCCTACAGCGTAACTACTACTAGTGACCTAGCTAGCTAGCTGGCCTGGAGTACATTAATTCATTG
GAGTA