Detailed information on CNT30102652


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596209Oryza rufipogonOryza meridionalis32.4311.6784.62143forward
CNT30577042Oryza rufipogonOryza barthii31.2910.5189.86138forward

Expression of CNT30102652

Peptides detected in this lncRNA

>peptide 1 (34 aa)
SPIKSAPFDLLPRHALAIVASHPAARNRRRKKRM*

Sequence

>CNT30102652
GTCGCCCATAAAATCAGCGCCGTTTGATCTCCTGCCCAGGCACGCGCTTGCCATCGTAGCCAGCCACCCAGCCGCTCGCAACAGGCGGAGGAAAAAAAGA
ATGTAGCCATCAAACCCATCGATTCCCCATTCTCTCGGCTGCCTCGTCGACTCCGACGGTGCCGCCGTTCCCCTTTCGTCTCCACCTCGCGCGCGCAGCT
CACGACGCTCGCCATCGTCGCTTCCCGGCGAGGCCATCCGCGGCCGCCGTTGCTTCTTCCCGGACGCCGCCACCATCTCCCCACCCCCACGCGGCACCCC
GTCTCGCCCTCTCTAGGGTTTTCTCGGATCAAGAATCGCTGTAAGCCACATTTCCCCACCCGTGCTACTCCCGAATCCGCAATCCCCATCCGAAGATCCT
TGCGACCTCCGCCCCAAGAGTCCTCGCCGCCGGTCGGCGCC