SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3023500 Populus trichocarpa 5:3553144-3555504 (-) coding (0.331)3e-22 (sp|Q9M081|SC24C_ARATH) 57 0.15 3
CNT3023499 Populus trichocarpa 5:3553202-3553722 (-) noncoding (-0.124518)0.000001 (sp|Q9M291|SC24B_ARATH) 44 0 2
CNT3023498 Populus trichocarpa 5:18855388-18855937 (-) noncoding (-0.0004096)- 37 11.08 1
CNT3023497 Populus trichocarpa 5:12174219-12187442 (+) noncoding (-0.0004096)- 35 25.48 2
CNT3023496 Populus trichocarpa 5:10779933-10782255 (-) noncoding (-0.012288)- 44 1.47 2
CNT3023495 Populus trichocarpa 5:23775294-23775772 (-) noncoding (-0.169165)- 97 1.93 2
CNT3023494 Populus trichocarpa 5:7832462-7833046 (-) noncoding (-0.0442368)- 58 0.54 2
CNT3023493 Populus trichocarpa 5:14817613-14818108 (+) noncoding (-0.0004096)- 35 106.34 1
CNT3023492 Populus trichocarpa 5:20558265-20559009 (-) noncoding (-0.0004096)- 68 4.1 2
CNT3023491 Populus trichocarpa 5:8970242-8970869 (-) noncoding (-0.0004096)- 55 2.43 2
CNT3023490 Populus trichocarpa 5:20618497-20620675 (+) noncoding (-0.2048)- 57 0.05 2
CNT3023489 Populus trichocarpa 5:1499698-1502706 (+) coding (0.023)- 66 2.9 4
CNT3023488 Populus trichocarpa 5:2207620-2219274 (-) noncoding (-0.167936)7e-36 (sp|W8JIS5|IO_CATRO) 67 15.99 2
CNT3023487 Populus trichocarpa 5:1447883-1476305 (-) noncoding (-0.0233472)3e-36 (sp|O64477|Y2913_ARATH) 60 4.48 2
CNT3023486 Populus trichocarpa 5:4335095-4354458 (+) noncoding (-0.0004096)0.00000007 (sp|Q9SI85|DRL14_ARATH) 38 13.95 2
CNT3023485 Populus trichocarpa 5:5315775-5315981 (+) noncoding (-0.0004096)- - 31.06 1
CNT3023484 Populus trichocarpa 5:6161791-6162397 (+) noncoding (-0.0004096)- 54 72.83 2
CNT3023483 Populus trichocarpa 5:4293819-4296598 (-) noncoding (-0.0507904)- 35 12.09 2
CNT3023482 Populus trichocarpa 5:17823119-17823554 (-) noncoding (-0.036864)- 44 70.47 2
CNT3023481 Populus trichocarpa 5:6947700-6948426 (+) noncoding (-0.0585728)- 38 4.12 2
CNT3023480 Populus trichocarpa 5:3982499-3987285 (+) noncoding (-0.0004096)2e-31 (sp|Q0JEU6|LERK3_ORYSJ) 33 15.87 2
CNT3023479 Populus trichocarpa 5:6077330-6115568 (-) noncoding (-0.012288)8e-42 (sp|P51414|RL261_ARATH) 70 122.73 2
CNT3023478 Populus trichocarpa 5:6284754-6286287 (+) noncoding (-0.0851968)- 86 1.27 1
CNT3023476 Populus trichocarpa 5:23310900-23311414 (-) noncoding (-0.0004096)- 31 17.63 1
CNT3023475 Populus trichocarpa 5:12174219-12193486 (+) noncoding (-0.0004096)4e-30 (sp|Q9T020|Y4391_ARATH) 35 4.88 2
CNT3023474 Populus trichocarpa 5:119441-121260 (+) noncoding (-0.028672)- 49 24.63 4
CNT3023473 Populus trichocarpa 5:17093833-17094731 (+) noncoding (-0.0004096)- 41 6.13 3
CNT3023472 Populus trichocarpa 5:10056648-10057697 (-) noncoding (-0.012288)- 51 5.25 2
CNT3023470 Populus trichocarpa 5:23542518-23546110 (-) noncoding (-0.057344)- 40 27.97 2
CNT3023469 Populus trichocarpa 5:6691649-6692931 (-) noncoding (-0.073728)- 76 6.32 1
CNT3023468 Populus trichocarpa 5:6763543-6765054 (+) noncoding (-0.098304)- 58 12.63 1
CNT3023467 Populus trichocarpa 5:4156424-4157495 (-) noncoding (-0.073728)- 57 39.8 1
CNT3023466 Populus trichocarpa 5:4862803-4863684 (+) noncoding (-0.0004096)- 39 14.92 1
CNT3023465 Populus trichocarpa 5:11943821-11945249 (-) noncoding (-0.049152)3e-57 (sp|Q9FH92|IX15L_ARATH) 63 22.61 2
CNT3023464 Populus trichocarpa 5:2323914-2327983 (+) noncoding (-0.04096)- 52 6.37 5
CNT3023463 Populus trichocarpa 5:9425155-9425567 (-) noncoding (-0.0004096)- 33 20.73 1
CNT3023462 Populus trichocarpa 5:25428261-25428554 (-) noncoding (-0.0004096)- 38 34.07 1
CNT3023461 Populus trichocarpa 5:10779933-10781355 (-) noncoding (-0.038912)- 76 181.05 2
CNT3023460 Populus trichocarpa 5:22718506-22726772 (-) noncoding (-0.139264)- 43 3.08 2
CNT3023459 Populus trichocarpa 5:13059583-13060395 (-) noncoding (-0.0004096)- - 16.89 1
CNT3023458 Populus trichocarpa 5:24857458-24858179 (+) noncoding (-0.0004096)- 30 49.33 2
CNT3023457 Populus trichocarpa 5:11458347-11459079 (+) noncoding (-0.02048)- 50 25.46 3
CNT3023456 Populus trichocarpa 5:2818015-2818396 (+) noncoding (-0.3072)- 34 42.9 2
CNT3023455 Populus trichocarpa 5:174059-174595 (+) noncoding (-0.0004096)- - 6.64 1
CNT3023454 Populus trichocarpa 5:2943525-2943792 (-) noncoding (-0.0004096)- 36 53.31 1
CNT3023453 Populus trichocarpa 5:7581100-7583938 (-) noncoding (-0.0094208)- 60 115.3 2
CNT3023452 Populus trichocarpa 5:23558227-23561198 (-) noncoding (-0.0282624)- 57 9.95 2
CNT3023451 Populus trichocarpa 5:22446279-22446788 (-) noncoding (-0.0004096)- 47 17.31 1
CNT3023450 Populus trichocarpa 5:15505678-15506431 (-) noncoding (-0.0495616)- 36 15.43 2
CNT3023448 Populus trichocarpa 5:9434981-9435181 (-) noncoding (-0.0004096)- - 36.69 1